Annotation Detail for OPTC
Basic Information Top
| Gene Symbol: | OPTC ( OPT ) |
|---|---|
| Gene Full Name: | opticin |
| Band: | 1q32.1 |
| Quick Links | Entrez ID:26254; OMIM: 605127; Uniprot ID:OPT_HUMAN; ENSEMBL ID: ENSG00000188770; HGNC ID: 8158 |
| Relate to Another Database: | SFARIGene; denovo-db |
| Location(AA) | Modification | |
|---|---|---|
| 71 | Sulfotyrosine (Potential). | |
| 312 | N-linked (GlcNAc...). | |
| Location(AA) | Modifications | Resource |
|---|---|---|
| 71 | Sulfotyrosine (Potential). | Swiss-Prot 53.0 |
| 312 | N-linked (GlcNAc...). | Swiss-Prot 53.0 |
| Location(AA) | Modification | Resource |
|---|---|---|
| 56 | Phosphotyrosine(EGFR) | HMM predict |
| 56 | Phosphotyrosine(Abl) | HMM predict |
| 56 | Phosphotyrosine(INSR) | HMM predict |
| 65 | Phosphotyrosine(EGFR) | HMM predict |
| 65 | Phosphotyrosine(INSR) | HMM predict |
| 65 | Phosphotyrosine(Syk) | HMM predict |
| 71 | Sulfotyrosine | HMM predict |
| 90 | Phosphoserine(CDC2) | HMM predict |
| 95 | O-linked | HMM predict |
| 96 | O-linked | HMM predict |
| 96 | O-linked | HMM predict |
| 100 | Phosphothreonine(CDK) | HMM predict |
| 100 | O-linked | HMM predict |
| 100 | Phosphothreonine(MAPK) | HMM predict |
| 102 | O-linked | HMM predict |
| 103 | Phosphoserine(IKK) | HMM predict |
| 103 | O-linked | HMM predict |
| 104 | N-linked | HMM predict |
| 106 | O-linked | HMM predict |
| 111 | Phosphothreonine(PKA) | HMM predict |
| 112 | Phosphothreonine(PKA) | HMM predict |
| 119 | Phosphoserine(ATM) | HMM predict |
| 312 | N-linked | HMM predict |
| 327 | Proline | HMM predict |
- RefSeq ID: NM_014359
- Location:chr1 201729893-201744699
- strand:+
| No data |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| ER | MCF7 | GSE19013 | 201755123 | 201755731 | 608 | 10728 |
| Fos | K562 | GSE19551 | 201755029 | 201755573 | 544 | 10602 |
| Nanog | ES | GSE20650 | 201754925 | 201755714 | 789 | 10620 |
| Nanog | hES | GSE18292 | 201755011 | 201755467 | 456 | 10540 |
| Oct4 | hES | GSE21916 | 201754900 | 201756003 | 1103 | 10752 |
| P300 | T30-glioblastoma | GSE21026 | 201748117 | 201749346 | 1229 | 4032 |
| Rb | Quiescent | GSE19898 | 201748504 | 201748887 | 383 | 3996 |
| Sox2 | hES | GSE18292 | 201755051 | 201755464 | 413 | 10558 |
| TFAP2C | MCF7 | GSE21234 | 201753112 | 201753646 | 534 | 8680 |
| TFAP2C | MCF7 | GSE21234 | 201762190 | 201763289 | 1099 | 18040 |
| p130 | shRbQuiescent | GSE19898 | 201748445 | 201749308 | 863 | 4177 |
| p130 | shRbSenescent | GSE19898 | 201748469 | 201749599 | 1130 | 4335 |
| p130 | shRbSenescent | GSE19898 | 201756266 | 201756573 | 307 | 11720 |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | CD4 | GSE12889 | 201740404 | 201740745 | 341 | 0 |
| CTCF | CD4 | SISSRdata | 201740404 | 201740745 | 341 | 0 |
Validated miRNA targets