AutismKB 2.0

Annotation Detail for GATM


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Basic Information Top
Gene Symbol:GATM ( AGAT,AT )
Gene Full Name: glycine amidinotransferase (L-arginine:glycine amidinotransferase)
Band: 15q21.1
Quick LinksEntrez ID:2628; OMIM: 602360; Uniprot ID:GATM_HUMAN; ENSEMBL ID: ENSG00000171766; HGNC ID: 4175
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
385N6-acetyllysine.
417Phosphothreonine (By similarity).
Location(AA) Modifications Resource
417Phosphothreonine (By similarity).Swiss-Prot 53.0
Location(AA) Modification Resource
39O-linkedHMM predict
39O-linkedHMM predict
49Phosphoserine(IKK)HMM predict
99Phosphothreonine(PKC)HMM predict
140Phosphothreonine(PKC)HMM predict
164Phosphotyrosine(SRC)HMM predict
217O-linkedHMM predict
331MethyllysineHMM predict
332MethyllysineHMM predict
339Phosphothreonine(CDK)HMM predict
417Phosphothreonine(PKC)HMM predict
417Phosphothreonine(PKA)HMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_001482
  • Location:chr15 43440615-43457997
  • strand:-
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
FoxA1 MCF7MACSdata 43466878 43467135 257 9009
P300 T0-glioblastomaGSE21026 43466873 43467525 652 9202
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
Oct1 HelaGSE14283 43440156 43440191 35 442
Oct1 HelaGSE14283 43440260 43440304 44 334
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 43457449 43458141 692 0
Nanog ESGSE20650 43451543 43451966 423 0
Rb GrowingGSE19898 43457541 43457811 270 0
Rb SenescentGSE19898 43457628 43457918 290 0
hScc1 BcellGSE12603 43457743 43458215 472 0
Validated miRNA targets Top
Cis-Nats regulation Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018