AutismKB 2.0

Annotation Detail for GNL3


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Basic Information Top
Gene Symbol:GNL3 ( C77032,E2IG3,MGC800,NS )
Gene Full Name: guanine nucleotide binding protein-like 3 (nucleolar)
Band: 3p21.1
Quick LinksEntrez ID:26354; OMIM: 608011; Uniprot ID:GNL3_HUMAN; ENSEMBL ID: ENSG00000163938; HGNC ID: 29931
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
79N6-acetyllysine.
529Phosphoserine.
Location(AA) Modifications Resource
Location(AA) Modification Resource
178N-linkedHMM predict
201Phosphothreonine(PKC)HMM predict
312Phosphoserine(CDC2)HMM predict
324Phosphoserine(CDK)HMM predict
342Phosphoserine(ATM)HMM predict
410Phosphothreonine(MAPK)HMM predict
490Phosphoserine(CK2)HMM predict
494Phosphothreonine(CK2)HMM predict
542SulfotyrosineHMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_014366
  • Location:chr3 52694975-52703547
  • strand:+
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
PHF8 Hs68plusFBSGSE20725 52694157 52695711 1554 42
No data
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
ETS1 JurkatGSE17954 52694188 52695781 1593 0
FOXA1 MCF7GSE15244 52694977 52695524 547 0
FOXA1 MCF7GSE15244 52697059 52698224 1165 0
H3K4me2 HCT116GSE10453 52696484 52696692 208 0
H3K4me3 colorectalcancer 52695269 52696158 889 0
H3ac HepG2E 52695057 52696692 1635 0
Myc K562GSE19551 52694329 52695779 1450 0
PHF8 293TGSE20725 52694347 52695759 1412 0
PHF8 HeLaGSE20725 52694336 52695992 1656 0
Pol2 GM12878GSE19551 52694332 52695772 1440 0
TAF HelaGSE8489 52695341 52696158 817 0
TAF k562GSE8489 52695057 52696410 1353 0
TAFII hESGSE17917 52694707 52695468 761 0
hScc1 CdLSGSE12603 52694977 52695451 474 0
Validated miRNA targets Top
Cis-Nats regulation Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018