AutismKB 2.0

Annotation Detail for LHX6


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Basic Information Top
Gene Symbol:LHX6 ( LHX6.1,MGC119542,MGC119544,MGC119545 )
Gene Full Name: LIM homeobox 6
Band: 9q33.2
Quick LinksEntrez ID:26468; OMIM: 608215; Uniprot ID:LHX6_HUMAN; ENSEMBL ID: ENSG00000106852; HGNC ID: 21735
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_199160
  • Location:chr9 124004680-124030804
  • strand:-
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
Fos K562GSE19551 124031018 124031381 363 395
H3K27me3 colorectalcancer 124031333 124032756 1423 1240
H3K27me3 colorectalcancer 124033215 124033504 289 2555
H3K27me3 colorectalcancer 124035920 124036514 594 5413
No data
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
H3K27me3 colorectalcancer 124029042 124029905 863 0
Nanog hESGSE18292 124006351 124006692 341 0
Rb GrowingGSE19898 124029763 124029857 94 0
Rb shRbQuiescentGSE19898 124008224 124008417 193 0
hScc1 BcellGSE12603 124015461 124016154 693 0
hScc1 BcellGSE12603 124030665 124030922 257 0
Validated miRNA targets Top
Cis-Nats regulation Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018