Annotation Detail for EIF2C1
Basic Information Top
| Gene Symbol: | EIF2C1 ( AGO1,DKFZp686M13167,EIF2C,GERP95,Q99 ) |
|---|---|
| Gene Full Name: | eukaryotic translation initiation factor 2C, 1 |
| Band: | 1p34.3 |
| Quick Links | Entrez ID:26523; OMIM: 606228; Uniprot ID:AGO1_HUMAN; ENSEMBL ID: ENSG00000092847; HGNC ID: |
| Relate to Another Database: | SFARIGene; denovo-db |
Post Translation Modification- RefSeq ID: NM_012199
- Location:chr1 36121396-36162483
- strand:+
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | CD4 | GSE12889 | 36121061 | 36121434 | 373 | 149 |
| CTCF | CD4 | SISSRdata | 36121061 | 36121434 | 373 | 149 |
| CTCF | G2 | GSE9613 | 36121027 | 36121415 | 388 | 176 |
| H3ac | HepG2 | E | 36107813 | 36108065 | 252 | 13458 |
| NRSF | Jurkat | GSE13047 | 36114903 | 36115775 | 872 | 6058 |
| NRSF | Jurkat | SISSRdata | 36115222 | 36115618 | 396 | 5977 |
| NRSF | mAb | Jurkat | 36111458 | 36112010 | 552 | 9663 |
| NRSF | mAb | Jurkat | 36115200 | 36115715 | 515 | 5939 |
| NRSF | mAb | Jurkat | 36116671 | 36116935 | 264 | 4594 |
| NRSF | mAb | Jurkat | 36117964 | 36118466 | 502 | 3182 |
| NRSF | mAb | Jurkat | 36119873 | 36121114 | 1241 | 903 |
| NRSF-mono | Jurkat | QuESTdata | 36114920 | 36115709 | 789 | 6082 |
| NRSF-poly | Jurkat | QuESTdata | 36115061 | 36115775 | 714 | 5979 |
| Oct1 | H2O2-Hela | GSE14283 | 36110563 | 36110590 | 27 | 10820 |
| Oct1 | Hela | GSE14283 | 36110559 | 36110596 | 37 | 10819 |
| TAF | k562 | GSE8489 | 36107813 | 36108348 | 535 | 13316 |
| TAF | k562 | GSE8489 | 36120462 | 36120922 | 460 | 705 |
| No data |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| H3ac | HepG2 | E | 36124686 | 36125293 | 607 | 0 |
| NFkBII | GM12878 | GSE19485 | 36131749 | 36133141 | 1392 | 0 |
| Oct1 | Hela | GSE14283 | 36123261 | 36123296 | 35 | 0 |
| Oct1 | Hela | GSE14283 | 36127529 | 36127556 | 27 | 0 |
| Oct4 | hES | GSE21916 | 36124025 | 36124729 | 704 | 0 |
| Micro RNA Name | Stem Loop Name | The chromosome that miRNA located | Publication |
|---|---|---|---|
| hsa-let-7a | hsa-let-7a-1 | 9 | 19898466 |
| hsa-let-7a | hsa-let-7a-2 | 11 | 19898466 |
| hsa-let-7a | hsa-let-7a-3 | 22 | 19898466 |
| hsa-let-7a | hsa-let-7a-1 | 9 | 16756390 |
| hsa-let-7a | hsa-let-7a-2 | 11 | 16756390 |
| hsa-let-7a | hsa-let-7a-3 | 22 | 16756390 |
| hsa-let-7a* | hsa-let-7a-1 | 9 | 19898466 |
| hsa-let-7a* | hsa-let-7a-3 | 22 | 19898466 |
| hsa-let-7a* | hsa-let-7a-1 | 9 | 16756390 |
| hsa-let-7a* | hsa-let-7a-3 | 22 | 16756390 |
| hsa-let-7b | hsa-let-7b | 22 | 19898466 |
| hsa-let-7b | hsa-let-7b | 22 | 16756390 |
| hsa-let-7b* | hsa-let-7b | 22 | 19898466 |
| hsa-let-7b* | hsa-let-7b | 22 | 16756390 |
| hsa-let-7c | hsa-let-7c | 21 | 19898466 |
| hsa-let-7c | hsa-let-7c | 21 | 16756390 |
| hsa-let-7c* | hsa-let-7c | 21 | 19898466 |
| hsa-let-7c* | hsa-let-7c | 21 | 16756390 |
| hsa-let-7d | hsa-let-7d | 9 | 19898466 |
| hsa-let-7d | hsa-let-7d | 9 | 16756390 |
| hsa-let-7d* | hsa-let-7d | 9 | 19898466 |
| hsa-let-7d* | hsa-let-7d | 9 | 16756390 |
| hsa-let-7e | hsa-let-7e | 19 | 19898466 |
| hsa-let-7e | hsa-let-7e | 19 | 16756390 |
| hsa-let-7e* | hsa-let-7e | 19 | 19898466 |
| hsa-let-7e* | hsa-let-7e | 19 | 16756390 |
| hsa-let-7f | hsa-let-7f-1 | 9 | 20716115 |
| hsa-let-7f | hsa-let-7f-2 | X | 20716115 |
| hsa-let-7f | hsa-let-7f-1 | 9 | 19898466 |
| hsa-let-7f | hsa-let-7f-2 | X | 19898466 |
| hsa-let-7f | hsa-let-7f-1 | 9 | 16756390 |
| hsa-let-7f | hsa-let-7f-2 | X | 16756390 |
| hsa-let-7f-1* | hsa-let-7f-1 | 9 | 19898466 |
| hsa-let-7f-1* | hsa-let-7f-1 | 9 | 16756390 |
| hsa-let-7f-2* | hsa-let-7f-2 | X | 19898466 |
| hsa-let-7f-2* | hsa-let-7f-2 | X | 16756390 |
| hsa-let-7g | hsa-let-7g | 3 | 19898466 |
| hsa-let-7g | hsa-let-7g | 3 | 16756390 |
| hsa-let-7g* | hsa-let-7g | 3 | 19898466 |
| hsa-let-7g* | hsa-let-7g | 3 | 16756390 |
| hsa-let-7i | hsa-let-7i | 12 | 19898466 |
| hsa-let-7i | hsa-let-7i | 12 | 16756390 |
| hsa-let-7i* | hsa-let-7i | 12 | 19898466 |
| hsa-let-7i* | hsa-let-7i | 12 | 16756390 |
| hsa-miR-100 | hsa-mir-100 | 11 | 19851984 |
| hsa-miR-100 | hsa-mir-100 | 11 | 19138993 |
| hsa-miR-100 | hsa-mir-100 | 11 | 20732906 |
| hsa-miR-100* | hsa-mir-100 | 11 | 19851984 |
| hsa-miR-100* | hsa-mir-100 | 11 | 19138993 |
| hsa-miR-100* | hsa-mir-100 | 11 | 20732906 |
| hsa-miR-124 | hsa-mir-124-1 | 8 | 19898466 |
| hsa-miR-124 | hsa-mir-124-2 | 8 | 19898466 |
| hsa-miR-124 | hsa-mir-124-3 | 20 | 19898466 |
| hsa-miR-124 | hsa-mir-124-1 | 8 | 19851984 |
| hsa-miR-124 | hsa-mir-124-1 | 8 | 19536157 |
| hsa-miR-124 | hsa-mir-124-2 | 8 | 19536157 |
| hsa-miR-124 | hsa-mir-124-3 | 20 | 19536157 |
| hsa-miR-124 | hsa-mir-124-1 | 8 | 19138993 |
| hsa-miR-124 | hsa-mir-124-1 | 8 | 20732906 |
| hsa-miR-124* | hsa-mir-124-1 | 8 | 19851984 |
| hsa-miR-124* | hsa-mir-124-1 | 8 | 19138993 |
| hsa-miR-124* | hsa-mir-124-1 | 8 | 20732906 |
| hsa-miR-145 | hsa-mir-145 | 5 | 20716115 |
| hsa-miR-145* | hsa-mir-145 | 5 | 20716115 |
| hsa-miR-146a | hsa-mir-146a | 5 | 19138993 |
| hsa-miR-146a | hsa-mir-146a | 5 | 20732906 |
| hsa-miR-146a* | hsa-mir-146a | 5 | 19138993 |
| hsa-miR-146a* | hsa-mir-146a | 5 | 20732906 |
| hsa-miR-151-3p | hsa-mir-151 | 8 | 21319996 |
| hsa-miR-151-5p | hsa-mir-151 | 8 | 21319996 |
| hsa-miR-155 | hsa-mir-155 | 21 | 19956200 |
| hsa-miR-155* | hsa-mir-155 | 21 | 19956200 |
| hsa-miR-16 | hsa-mir-16-1 | 13 | 15766526 |
| hsa-miR-16 | hsa-mir-16-2 | 3 | 15766526 |
| hsa-miR-182 | hsa-mir-182 | 7 | 21282978 |
| hsa-miR-182 | hsa-mir-182 | 7 | 20716115 |
| hsa-miR-182* | hsa-mir-182 | 7 | 21282978 |
| hsa-miR-182* | hsa-mir-182 | 7 | 20716115 |
| hsa-miR-196a | hsa-mir-196a-2 | 12 | 19851984 |
| hsa-miR-196a | hsa-mir-196a-2 | 12 | 19138993 |
| hsa-miR-196a | hsa-mir-196a-2 | 12 | 20732906 |
| hsa-miR-196a* | hsa-mir-196a-2 | 12 | 19851984 |
| hsa-miR-196a* | hsa-mir-196a-2 | 12 | 19138993 |
| hsa-miR-196a* | hsa-mir-196a-2 | 12 | 20732906 |
| hsa-miR-200c | hsa-mir-200c | 12 | 20716115 |
| hsa-miR-200c* | hsa-mir-200c | 12 | 20716115 |
| hsa-miR-210 | hsa-mir-210 | 11 | 20716115 |
| hsa-miR-214 | hsa-mir-214 | 1 | 20716115 |
| hsa-miR-214* | hsa-mir-214 | 1 | 20716115 |
| hsa-miR-219-1-3p | hsa-mir-219-1 | 6 | 19851984 |
| hsa-miR-219-1-3p | hsa-mir-219-1 | 6 | 19138993 |
| hsa-miR-219-1-3p | hsa-mir-219-1 | 6 | 20732906 |
| hsa-miR-219-5p | hsa-mir-219-1 | 6 | 19851984 |
| hsa-miR-219-5p | hsa-mir-219-1 | 6 | 19138993 |
| hsa-miR-219-5p | hsa-mir-219-1 | 6 | 20732906 |
| hsa-miR-222 | hsa-mir-222 | X | 21282978 |
| hsa-miR-222 | hsa-mir-222 | X | 20716115 |
| hsa-miR-222 | hsa-mir-222 | X | 19956200 |
| hsa-miR-222* | hsa-mir-222 | X | 21282978 |
| hsa-miR-222* | hsa-mir-222 | X | 20716115 |
| hsa-miR-222* | hsa-mir-222 | X | 19956200 |
| hsa-miR-223* | hsa-mir-223 | X | 21282978 |
| hsa-miR-23a | hsa-mir-23a | 19 | 20716115 |
| hsa-miR-23a* | hsa-mir-23a | 19 | 20716115 |
| hsa-miR-26a | hsa-mir-26a-1 | 3 | 19851984 |
| hsa-miR-26a | hsa-mir-26a-2 | 12 | 19851984 |
| hsa-miR-26a | hsa-mir-26a-1 | 3 | 19138993 |
| hsa-miR-26a | hsa-mir-26a-1 | 3 | 20732906 |
| hsa-miR-26a-1* | hsa-mir-26a-1 | 3 | 19851984 |
| hsa-miR-26a-1* | hsa-mir-26a-1 | 3 | 19138993 |
| hsa-miR-26a-1* | hsa-mir-26a-1 | 3 | 20732906 |
| hsa-miR-30a | hsa-mir-30a | 6 | 19851984 |
| hsa-miR-30a | hsa-mir-30a | 6 | 19138993 |
| hsa-miR-30a | hsa-mir-30a | 6 | 20732906 |
| hsa-miR-30a | hsa-mir-30a | 6 | 19767416 |
| hsa-miR-30a* | hsa-mir-30a | 6 | 19851984 |
| hsa-miR-30a* | hsa-mir-30a | 6 | 19138993 |
| hsa-miR-30a* | hsa-mir-30a | 6 | 20732906 |
| hsa-miR-30a* | hsa-mir-30a | 6 | 19767416 |
| hsa-miR-30c | hsa-mir-30c-1 | 1 | 19851984 |
| hsa-miR-30c | hsa-mir-30c-1 | 1 | 19138993 |
| hsa-miR-30c | hsa-mir-30c-1 | 1 | 20732906 |
| hsa-miR-30c-1* | hsa-mir-30c-1 | 1 | 19851984 |
| hsa-miR-30c-1* | hsa-mir-30c-1 | 1 | 19138993 |
| hsa-miR-30c-1* | hsa-mir-30c-1 | 1 | 20732906 |
| hsa-miR-30d | hsa-mir-30d | 8 | 21319996 |
| hsa-miR-30d* | hsa-mir-30d | 8 | 21319996 |
| hsa-miR-320a | hsa-mir-320a | 8 | 18852463 |
| hsa-miR-320b | hsa-mir-320b-1 | 1 | 18852463 |
| hsa-miR-320b | hsa-mir-320b-2 | 1 | 18852463 |
| hsa-miR-320c | hsa-mir-320c-1 | 18 | 18852463 |
| hsa-miR-320c | hsa-mir-320c-2 | 18 | 18852463 |
| hsa-miR-320d | hsa-mir-320d-1 | 13 | 18852463 |
| hsa-miR-320d | hsa-mir-320d-2 | X | 18852463 |
| hsa-miR-373 | hsa-mir-373 | 19 | 19851984 |
| hsa-miR-373 | hsa-mir-373 | 19 | 19138993 |
| hsa-miR-373 | hsa-mir-373 | 19 | 20732906 |
| hsa-miR-373* | hsa-mir-373 | 19 | 19851984 |
| hsa-miR-373* | hsa-mir-373 | 19 | 19138993 |
| hsa-miR-373* | hsa-mir-373 | 19 | 20732906 |
| hsa-miR-423-3p | hsa-mir-423 | 17 | 19851984 |
| hsa-miR-423-3p | hsa-mir-423 | 17 | 19138993 |
| hsa-miR-423-3p | hsa-mir-423 | 17 | 20732906 |
| hsa-miR-423-5p | hsa-mir-423 | 17 | 19851984 |
| hsa-miR-423-5p | hsa-mir-423 | 17 | 19138993 |
| hsa-miR-423-5p | hsa-mir-423 | 17 | 20732906 |
| hsa-miR-424 | hsa-mir-424 | X | 19956200 |
| hsa-miR-424* | hsa-mir-424 | X | 19956200 |
| hsa-miR-492 | hsa-mir-492 | 12 | 19851984 |
| hsa-miR-492 | hsa-mir-492 | 12 | 19138993 |
| hsa-miR-492 | hsa-mir-492 | 12 | 20732906 |
| hsa-miR-503 | hsa-mir-503 | X | 19956200 |
| hsa-miR-604 | hsa-mir-604 | 10 | 19851984 |
| hsa-miR-604 | hsa-mir-604 | 10 | 19138993 |
| hsa-miR-604 | hsa-mir-604 | 10 | 20732906 |
| hsa-miR-608 | hsa-mir-608 | 10 | 19851984 |
| hsa-miR-608 | hsa-mir-608 | 10 | 19138993 |
| hsa-miR-608 | hsa-mir-608 | 10 | 20732906 |
| hsa-miR-631 | hsa-mir-631 | 15 | 19138993 |
| hsa-miR-631 | hsa-mir-631 | 15 | 20732906 |
| hsa-miR-9 | hsa-mir-9-1 | 1 | 19956200 |
| hsa-miR-9 | hsa-mir-9-2 | 5 | 19956200 |
| hsa-miR-9 | hsa-mir-9-3 | 15 | 19956200 |
| No data |
| Cluster ID | Plue Type | Plus Gene Name | Plus Chromosome | Plus Start | Plus End | Overlap Length | Minus Type | Minus Gene Name | Minus Chromosome | Minus Star | Minus End | Type |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 570 | mRNA | EIF2C1 | chr1 | 36017902 | 36058992 | 60 | EST | chr1 | 36027058 | 36027310 | Sense/Antisense (SA) pairs | |