AutismKB 2.0

Annotation Detail for NPTN


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Basic Information Top
Gene Symbol:NPTN ( DKFZp686L2477,GP55,GP65,MGC102805,SDFR1,SDR1,np55,np65 )
Gene Full Name: neuroplastin
Band: 15q24.1
Quick LinksEntrez ID:27020; OMIM: 612820; Uniprot ID:NPTN_HUMAN; ENSEMBL ID: ENSG00000156642; HGNC ID: 17867
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
171N-linked (GlcNAc...) (Potential).
197N-linked (GlcNAc...) (Potential).
229N-linked (GlcNAc...).
284N-linked (GlcNAc...).
296N-linked (GlcNAc...).
317N-linked (GlcNAc...) (Potential).
Location(AA) Modifications Resource
55N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
81N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
113N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
168N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
180N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
201N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
Location(AA) Modification Resource
36Phosphothreonine(PKC)HMM predict
55N-linkedHMM predict
81N-linkedHMM predict
84N-linkedHMM predict
97PhosphoserineHMM predict
100Phosphotyrosine(INSR)HMM predict
168N-linkedHMM predict
180N-linkedHMM predict
181Phosphotyrosine(EGFR)HMM predict
181Phosphotyrosine(INSR)HMM predict
185N-linkedHMM predict
198Phosphotyrosine(INSR)HMM predict
201N-linkedHMM predict
204N-linkedHMM predict
208O-linkedHMM predict
266N-linkedHMM predict
269N-linkedHMM predict
270N-linkedHMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_012428
  • Location:chr15 71639410-71712805
  • strand:-
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 71715816 71716271 455 3238
CTCF CD4SISSRdata 71715816 71716271 455 3238
CTCF G2GSE9613 71715859 71716461 602 3355
Fos K562GSE19551 71712619 71713244 625 126
Myc K562GSE19551 71712697 71713339 642 213
Oct1 HelaGSE14283 71719959 71719996 37 7172
Rb GrowingGSE19898 71715999 71716158 159 3273
Rb SenescentGSE19898 71712645 71713107 462 71
TAF HelaGSE8489 71713100 71714225 1125 857
TFAP2C MCF7GSE21234 71726642 71727179 537 14105
USF1 HepG2E 71712818 71714323 1505 765
USF2 HepG2E 71712892 71714005 1113 643
hScc1 BcellGSE12603 71715859 71716427 568 3338
hScc1 CdLSGSE12603 71715859 71716387 528 3318
p130 QuiescentGSE19898 71712851 71713472 621 356
p130 QuiescentGSE19898 71713498 71713686 188 787
p130 SenescentGSE19898 71712736 71713157 421 141
p130 SenescentGSE19898 71713177 71713892 715 729
p130 SenescentGSE19898 71714067 71714335 268 1396
p130 shRbQuiescentGSE19898 71712770 71713340 570 250
p130 shRbSenescentGSE19898 71712517 71713407 890 157
No data
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 71640005 71640185 180 0
CTCF CD4SISSRdata 71640005 71640185 180 0
CTCF G2GSE9613 71639940 71640391 451 0
CTCF G2GSE9613 71712318 71712757 439 0
Fos K562GSE19551 71643766 71644088 322 0
FoxA1 MCF7MACSdata 71687197 71687440 243 0
H3K4me2 HCT116GSE10453 71711087 71711616 529 0
H3K4me3 colorectalcancer 71710297 71712035 1738 0
H3ac HepG2E 71710147 71712260 2113 0
Myc K562GSE19551 71643479 71644100 621 0
Nanog hESGSE18292 71685413 71685908 495 0
TFAP2C MCF7GSE21234 71648681 71649158 477 0
USF1 HepG2E 71709726 71712260 2534 0
hScc1 BcellGSE12603 71655368 71655664 296 0
hScc1 BcellGSE12603 71712186 71712924 738 0
Validated miRNA targets Top
Cis-Nats regulation Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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