Annotation Detail for GJB2
Basic Information
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| Gene Symbol: | GJB2 ( CX26,DFNA3,DFNA3A,DFNB1,DFNB1A,HID,KID,NSRD1,PPK ) |
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| Gene Full Name: | gap junction protein, beta 2, 26kDa |
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| Band: | 13q12.11 |
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| Quick Links | Entrez ID:2706; OMIM: 121011; Uniprot ID:CXB2_HUMAN; ENSEMBL ID: ENSG00000165474; HGNC ID: 4284 |
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| Relate to Another Database: |
SFARIGene;
denovo-db |
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
- RefSeq ID: NM_004004
- Location:chr13 19659608-19665036
- strand:-
| Transcrip Factors |
Experimental Cell |
Database |
TF Binding Start |
TF Binding End |
TF Binding Length |
The Distance to Gene |
|---|
| CTCF |
CD4 | GSE12889 | 19669597 |
19669776 |
179 |
4650 |
| CTCF |
CD4 | SISSRdata | 19669597 |
19669776 |
179 |
4650 |
| CTCF |
G2 | GSE9613 | 19669200 |
19669671 |
471 |
4399 |
| H3K27me3 |
colorectal | cancer | 19666264 |
19667545 |
1281 |
1868 |
| hScc1 |
Bcell | GSE12603 | 19669412 |
19669987 |
575 |
4663 |
| hScc1 |
CdLS | GSE12603 | 19669412 |
19670059 |
647 |
4699 |
| hScc1 |
G2 | GSE9613 | 19669127 |
19669770 |
643 |
4412 |
| Transcrip Factors |
Experimental Cell |
Database |
TF Binding Start |
TF Binding End |
TF Binding Length |
The Distance to Gene |
|---|
| CBP |
T30-glioblastoma | GSE21026 | 19646752 |
19647634 |
882 |
12416 |
| CTCF |
CD4 | GSE12889 | 19654494 |
19654793 |
299 |
4965 |
| CTCF |
CD4 | SISSRdata | 19654494 |
19654793 |
299 |
4965 |
| CTCF |
Jurkat | GSE12889 | 19654352 |
19654682 |
330 |
5092 |
| CTCF |
G2 | GSE9613 | 19649186 |
19649772 |
586 |
10130 |
| CTCF |
G2 | GSE9613 | 19654487 |
19654825 |
338 |
4953 |
| P300 |
T30-glioblastoma | GSE21026 | 19646632 |
19647752 |
1120 |
12417 |
| RARG |
MCF7 | GSE15244 | 19646673 |
19647777 |
1104 |
12384 |
| Rb |
Growing | GSE19898 | 19646976 |
19647240 |
264 |
12501 |
| TFAP2C |
MCF7 | GSE21234 | 19646663 |
19647482 |
819 |
12536 |
| hScc1 |
Bcell | GSE12603 | 19649004 |
19649223 |
219 |
10495 |
| hScc1 |
Bcell | GSE12603 | 19649635 |
19650129 |
494 |
9727 |
| hScc1 |
Bcell | GSE12603 | 19654381 |
19654896 |
515 |
4970 |
| hScc1 |
CdLS | GSE12603 | 19654296 |
19654863 |
567 |
5029 |
| hScc1 |
G2 | GSE9613 | 19654418 |
19654896 |
478 |
4952 |
| p130 |
shRbQuiescent | GSE19898 | 19646970 |
19647734 |
764 |
12257 |
| Transcrip Factors |
Experimental Cell |
Database |
TF Binding Start |
TF Binding End |
TF Binding Length |
The Distance to Gene |
|---|
| CTCF |
G2 | GSE9613 | 19661379 |
19661747 |
368 |
0 |
| CTCF |
G2 | GSE9613 | 19664498 |
19664879 |
381 |
0 |
| Myc |
K562 | GSE19551 | 19661323 |
19661662 |
339 |
0 |
| RARG |
MCF7 | GSE15244 | 19664177 |
19664498 |
321 |
0 |
| Micro RNA Name |
Stem Loop Name |
The chromosome that miRNA located |
Publication |
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| hsa-miR-183 |
hsa-mir-183 |
7 |
20739942 |
| hsa-miR-183* |
hsa-mir-183 |
7 |
20739942 |
Cis-Nats regulation