AutismKB 2.0

Annotation Detail for FOXP1


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Basic Information Top
Gene Symbol:FOXP1 ( 12CC4,FLJ23741,MGC12942,MGC88572,MGC99551,QRF1,hFKH1B )
Gene Full Name: forkhead box P1
Band: 3p13
Quick LinksEntrez ID:27086; OMIM: 605515; Uniprot ID:FOXP1_HUMAN; ENSEMBL ID: ENSG00000114861; HGNC ID: 3823
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
440Phosphoserine.
Location(AA) Modifications Resource
Location(AA) Modification Resource
12N-linkedHMM predict
18N-linkedHMM predict
24N-linkedHMM predict
83Phosphoserine(CDK)HMM predict
83Phosphoserine(CDC2)HMM predict
122Phosphoserine(CDC2)HMM predict
147Phosphotyrosine(Syk)HMM predict
198Phosphoserine(CK1)HMM predict
248N-linkedHMM predict
265Phosphoserine(CK1)HMM predict
285Phosphothreonine(CDC2)HMM predict
292Phosphoserine(CK1)HMM predict
303SulfotyrosineHMM predict
390Phosphothreonine(PKC)HMM predict
392Phosphoserine(IKK)HMM predict
396Phosphoserine(CAMK2)HMM predict
396Phosphoserine(IKK)HMM predict
402Phosphoserine(IKK)HMM predict
406O-linkedHMM predict
409O-linkedHMM predict
411O-linkedHMM predict
415Phosphothreonine(CDK)HMM predict
415Phosphothreonine(MAPK)HMM predict
422O-linkedHMM predict
427O-linkedHMM predict
443Phosphotyrosine(Syk)HMM predict
459Phosphotyrosine(Syk)HMM predict
516N-linkedHMM predict
552N-linkedHMM predict
558N-linkedHMM predict
576Phosphoserine(IKK)HMM predict
592N-linkedHMM predict
597N-linkedHMM predict
616N-linkedHMM predict
620Phosphoserine(CK1)HMM predict
621Phosphoserine(CDC2)HMM predict
621PhosphoserineHMM predict
621Phosphoserine(ATM)HMM predict
621Phosphoserine(CDK)HMM predict
656N-linkedHMM predict
667Phosphotyrosine(EGFR)HMM predict
667Phosphotyrosine(Syk)HMM predict
667SulfotyrosineHMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_001012505
  • Location:chr3 71329725-71715829
  • strand:-
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
H3K4me3 colorectalcancer 71716157 71716779 622 639
H3ac HepG2E 71716157 71716707 550 603
Oct1 H2O2-HelaGSE14283 71721014 71721057 43 5206
Oct1 HelaGSE14283 71721014 71721057 43 5206
Oct1 HelaGSE14283 71725078 71725108 30 9264
RARA MCF7GSE15244 71716157 71716888 731 693
RARG MCF7GSE15244 71716483 71716888 405 856
TFAP2C MCF7GSE21234 71716281 71717060 779 841
hScc1 BcellGSE12603 71718215 71718977 762 2767
hScc1 CdLSGSE12603 71718180 71719246 1066 2884
hScc1 G2GSE9613 71718215 71718902 687 2729
No data
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CBP JurkatGSE17954 71575236 71577408 2172 0
CBP T30-glioblastomaGSE21026 71635593 71636975 1382 0
CBP T30-glioblastomaGSE21026 71642272 71643401 1129 0
CTCF CD4GSE12889 71548886 71549076 190 0
CTCF CD4GSE12889 71643919 71644248 329 0
CTCF CD4SISSRdata 71548886 71549076 190 0
CTCF CD4SISSRdata 71643919 71644248 329 0
CTCF G2GSE9613 71354026 71354202 176 0
CTCF G2GSE9613 71358598 71358781 183 0
CTCF G2GSE9613 71511877 71512176 299 0
CTCF G2GSE9613 71548454 71548593 139 0
CTCF G2GSE9613 71549028 71549169 141 0
CTCF G2GSE9613 71555182 71555465 283 0
CTCF G2GSE9613 71556441 71556588 147 0
CTCF G2GSE9613 71563987 71564324 337 0
CTCF G2GSE9613 71569288 71569578 290 0
CTCF G2GSE9613 71596141 71596318 177 0
CTCF G2GSE9613 71674462 71674783 321 0
CTCF G2GSE9613 71713344 71715721 2377 0
ER E2-MCF7GSE14664 71539715 71539750 35 0
ER E2-MCF7GSE14664 71542850 71542883 33 0
ER Fulvestrant-MCF7GSE14664 71542849 71542889 40 0
FOXA1 MCF7GSE15244 71339913 71341152 1239 0
FOXA1 MCF7GSE15244 71376667 71377206 539 0
FOXA1 MCF7GSE15244 71386278 71387023 745 0
FOXA1 MCF7GSE15244 71389878 71390679 801 0
FOXA1 MCF7GSE15244 71396978 71397803 825 0
FOXA1 MCF7GSE15244 71439961 71440248 287 0
FOXA1 MCF7GSE15244 71511912 71512433 521 0
FOXA1 MCF7GSE15244 71512717 71512962 245 0
FOXA1 MCF7GSE15244 71521683 71522670 987 0
FOXA1 MCF7GSE15244 71575966 71576849 883 0
FOXA1 MCF7GSE15244 71585085 71586199 1114 0
FOXA1 MCF7GSE15244 71588014 71588375 361 0
FOXA1 MCF7GSE15244 71593719 71594077 358 0
FOXA1 MCF7GSE15244 71644682 71645178 496 0
FOXA1 MCF7GSE15244 71664349 71665002 653 0
FOXA1 MCF7GSE15244 71711653 71712058 405 0
Fos K562GSE19551 71379326 71379923 597 0
FoxA1 MCF7MACSdata 71340362 71340925 563 0
H3ac HepG2E 71377683 71378163 480 0
H3ac HepG2E 71436662 71437618 956 0
H3ac HepG2E 71712336 71713172 836 0
KLF4 hESGSE17917 71341995 71342308 313 0
KLF4 hESGSE17917 71520988 71521226 238 0
Myc K562GSE19551 71528924 71529263 339 0
Myc hESGSE17917 71642957 71643305 348 0
Nanog hESGSE18292 71600106 71600515 409 0
Oct1 H2O2-HelaGSE14283 71406881 71406908 27 0
Oct1 H2O2-HelaGSE14283 71430004 71430034 30 0
Oct1 H2O2-HelaGSE14283 71524005 71524033 28 0
Oct1 H2O2-HelaGSE14283 71540244 71540270 26 0
Oct1 HelaGSE14283 71406880 71406928 48 0
Oct1 HelaGSE14283 71539721 71539758 37 0
Oct1 HelaGSE14283 71542843 71542888 45 0
Oct1 HelaGSE14283 71663554 71663588 34 0
Oct4 hESGSE21916 71437520 71438259 739 0
P300 T30-glioblastomaGSE21026 71635376 71636954 1578 0
P300 T30-glioblastomaGSE21026 71642325 71643689 1364 0
RARA MCF7GSE15244 71339775 71341121 1346 0
RARA MCF7GSE15244 71377983 71378955 972 0
RARA MCF7GSE15244 71386243 71387138 895 0
RARA MCF7GSE15244 71389579 71390679 1100 0
RARA MCF7GSE15244 71480085 71480307 222 0
RARA MCF7GSE15244 71516250 71516843 593 0
RARA MCF7GSE15244 71585085 71586235 1150 0
RARA MCF7GSE15244 71644044 71644367 323 0
RARG MCF7GSE15244 71340062 71341037 975 0
RARG MCF7GSE15244 71377949 71378738 789 0
RARG MCF7GSE15244 71386243 71387138 895 0
RARG MCF7GSE15244 71389579 71390679 1100 0
RARG MCF7GSE15244 71397314 71397803 489 0
RARG MCF7GSE15244 71516250 71516627 377 0
RARG MCF7GSE15244 71554648 71555507 859 0
RARG MCF7GSE15244 71644044 71645178 1134 0
RARG MCF7GSE15244 71668720 71669302 582 0
RNAII Tamoxifen-MCF7GSE14664 71542846 71542889 43 0
Rb SenescentGSE19898 71713545 71713930 385 0
STAT1 HeLaGSE12782 71635217 71637039 1822 0
STAT1 HeLaGSE12782 71648764 71650108 1344 0
STAT1 HeLaGSE12783 71635217 71636928 1711 0
STAT1 HeLaGSE12783 71648798 71650041 1243 0
TFAP2C MCF7GSE21234 71441199 71441527 328 0
TFAP2C MCF7GSE21234 71548780 71549194 414 0
TFAP2C MCF7GSE21234 71554938 71555538 600 0
TFAP2C MCF7GSE21234 71664507 71664966 459 0
TFAP2C MCF7GSE21234 71714790 71715319 529 0
USF2 HepG2E 71339775 71340922 1147 0
VDR GM10861-stimGSE22484 71508360 71509867 1507 0
hScc1 BcellGSE12603 71358328 71359162 834 0
hScc1 BcellGSE12603 71413118 71413400 282 0
hScc1 BcellGSE12603 71436558 71436912 354 0
hScc1 BcellGSE12603 71528971 71529150 179 0
hScc1 BcellGSE12603 71553657 71554130 473 0
hScc1 BcellGSE12603 71575821 71576186 365 0
hScc1 BcellGSE12603 71642330 71642615 285 0
hScc1 BcellGSE12603 71644720 71645043 323 0
hScc1 BcellGSE12603 71713315 71713580 265 0
hScc1 BcellGSE12603 71714148 71714578 430 0
hScc1 CdLSGSE12603 71352647 71352847 200 0
hScc1 CdLSGSE12603 71528971 71529150 179 0
hScc1 CdLSGSE12603 71713315 71713726 411 0
hScc1 G2GSE9613 71712642 71715902 3260 0
p130 SenescentGSE19898 71358624 71358854 230 0
Validated miRNA targets Top
Micro RNA Name Stem Loop Name The chromosome that miRNA located Publication
hsa-miR-1 hsa-mir-1-2 18 18593903
hsa-miR-1 hsa-mir-1-1 20 18593903
hsa-miR-106a hsa-mir-106a X 19349957
hsa-miR-106a* hsa-mir-106a X 19349957
hsa-miR-122 hsa-mir-122 18 19296470
hsa-miR-122* hsa-mir-122 18 19296470
hsa-miR-150 hsa-mir-150 19 19349957
hsa-miR-150* hsa-mir-150 19 19349957
hsa-miR-17 hsa-mir-17 13 18765795
hsa-miR-17* hsa-mir-17 13 18765795
hsa-miR-181b hsa-mir-181b-1 1 19349957
hsa-miR-181b hsa-mir-181b-2 9 19349957
hsa-miR-34a hsa-mir-34a 1 20598588
hsa-miR-34a* hsa-mir-34a 1 20598588
hsa-miR-9 hsa-mir-9-1 1 21248104
hsa-miR-9 hsa-mir-9-2 5 21248104
hsa-miR-9 hsa-mir-9-3 15 21248104
hsa-miR-92a hsa-mir-92a-1 13 18765795
hsa-miR-92a hsa-mir-92a-2 X 18765795
No data
Cis-Nats regulation Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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