AutismKB 2.0

Annotation Detail for CYTH4


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Basic Information Top
Gene Symbol:CYTH4 ( CYT4,DJ63G5.1,PSCD4 )
Gene Full Name: cytohesin 4
Band: 22q13.1
Quick LinksEntrez ID:27128; OMIM: 606514; Uniprot ID:CYH4_HUMAN; ENSEMBL ID: ENSG00000100055; HGNC ID: 9505
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
356Phosphoserine.
Location(AA) Modifications Resource
356Phosphoserine.Swiss-Prot 53.0
356PhosphoserinePhospho.ELM 6.0
Location(AA) Modification Resource
13Phosphoserine(CK1)HMM predict
52Phosphoserine(CK2)HMM predict
107N-linkedHMM predict
172S-palmitoylHMM predict
196N-linkedHMM predict
201N-linkedHMM predict
222N-linkedHMM predict
275Phosphothreonine(PKC)HMM predict
326N-linkedHMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_013385
  • Location:chr22 36008369-36041325
  • strand:+
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 35992985 35993335 350 15210
CTCF CD4SISSRdata 35992985 35993335 350 15210
CTCF JurkatGSE12889 35993087 35993351 264 15151
Fos K562GSE19551 36002789 36003233 444 5359
RARA MCF7GSE15244 35999340 35999657 317 8871
hScc1 BcellGSE12603 35992715 35992936 221 15544
hScc1 BcellGSE12603 35999241 35999445 204 9027
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 36042762 36043181 419 1646
CTCF CD4SISSRdata 36042762 36043181 419 1646
CTCF JurkatGSE12889 36042921 36043091 170 1681
CTCF G2GSE9613 36042842 36043230 388 1711
CTCF G2GSE9613 36044007 36044488 481 2922
Fos K562GSE19551 36056545 36056770 225 15332
Oct4 hESGSE21916 36050194 36051165 971 9354
P300 T30-glioblastomaGSE21026 36053653 36054527 874 12765
hScc1 BcellGSE12603 36042664 36043266 602 1640
hScc1 BcellGSE12603 36057172 36057754 582 16138
hScc1 CdLSGSE12603 36042806 36043266 460 1711
hScc1 G2GSE9613 36042664 36044528 1864 2271
p130 QuiescentGSE19898 36060779 36061091 312 19610
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CBP JurkatGSE17954 36031677 36036655 4978 0
CTCF G2GSE9613 36020951 36021119 168 0
ER MCF7GSE19013 36009044 36009607 563 0
ETS1 JurkatGSE17954 36035184 36036285 1101 0
KLF4 hESGSE17917 36009305 36009469 164 0
NFkBII GM12878GSE19485 36032319 36034935 2616 0
NFkBII GM12878GSE19485 36040128 36041529 1401 0
Nanog hESGSE18292 36031090 36031397 307 0
Sox2 hESGSE18292 36030957 36031393 436 0
TFAP2C MCF7GSE21234 36008428 36008742 314 0
TFAP2C MCF7GSE21234 36032803 36033239 436 0
VDR GM10855-stimGSE22484 36007573 36011762 4189 0
VDR GM10861-stimGSE22484 36007774 36011698 3924 0
hScc1 BcellGSE12603 36033056 36033838 782 0
hScc1 BcellGSE12603 36035927 36036252 325 0
p130 SenescentGSE19898 36016758 36017114 356 0
p130 shRbQuiescentGSE19898 36032545 36033914 1369 0
Validated miRNA targets Top
Cis-Nats regulation Top
Cluster ID Plue Type Plus Gene Name Plus Chromosome Plus Start Plus End Overlap Length Minus Type Minus Gene Name Minus Chromosome Minus Star Minus End Type
17442 mRNA PSCD4 chr22 36002923 36035880 24146 EST chr22 36011734 36037975 Non-exonic Bidirectional (NOB) pairs

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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