Annotation Detail for RTDR1
Basic Information Top
| Gene Symbol: | RTDR1 ( MGC16968 ) |
|---|---|
| Gene Full Name: | rhabdoid tumor deletion region gene 1 |
| Band: | 22q11.2 |
| Quick Links | Entrez ID:27156; OMIM: 605663; Uniprot ID:RTDR1_HUMAN; ENSEMBL ID: ENSG00000100218; HGNC ID: |
| Relate to Another Database: | SFARIGene; denovo-db |
| No data |
| No data |
| Location(AA) | Modification | Resource |
|---|---|---|
| 15 | N-linked | HMM predict |
| 61 | Phosphotyrosine(SRC) | HMM predict |
| 61 | Phosphotyrosine(Syk) | HMM predict |
| 266 | Phosphotyrosine(SRC) | HMM predict |
| 286 | Phosphothreonine(PKC) | HMM predict |
| 291 | N-linked | HMM predict |
| 324 | Phosphotyrosine(INSR) | HMM predict |
| 324 | Phosphotyrosine(Abl) | HMM predict |
| 324 | Phosphotyrosine(Syk) | HMM predict |
- RefSeq ID: NM_014433
- Location:chr22 21731593-21814240
- strand:-
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| Rb | Quiescent | GSE19898 | 21814221 | 21814398 | 177 | 69 |
| Rb | Senescent | GSE19898 | 21814096 | 21814534 | 438 | 75 |
| p130 | Quiescent | GSE19898 | 21814167 | 21814526 | 359 | 106 |
| p130 | Senescent | GSE19898 | 21814067 | 21814538 | 471 | 62 |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| NRSF | Jurkat | GSE13047 | 21725467 | 21726089 | 622 | 5816 |
| NRSF-mono | Jurkat | QuESTdata | 21725523 | 21725968 | 445 | 5848 |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | CD4 | GSE12889 | 21800709 | 21800909 | 200 | 0 |
| CTCF | CD4 | SISSRdata | 21800709 | 21800909 | 200 | 0 |
| CTCF | Hela | GSE12889 | 21800637 | 21800958 | 321 | 0 |
| CTCF | Jurkat | GSE12889 | 21800618 | 21800925 | 307 | 0 |
| CTCF | G2 | GSE9613 | 21742171 | 21742657 | 486 | 0 |
| CTCF | G2 | GSE9613 | 21798835 | 21799330 | 495 | 0 |
| CTCF | G2 | GSE9613 | 21800615 | 21801010 | 395 | 0 |
| Fos | K562 | GSE19551 | 21739822 | 21742679 | 2857 | 0 |
| PHF8 | 293T | GSE20725 | 21741645 | 21742677 | 1032 | 0 |
| PHF8 | HeLa | GSE20725 | 21741719 | 21742676 | 957 | 0 |
| hScc1 | Bcell | GSE12603 | 21742317 | 21742915 | 598 | 0 |
| hScc1 | Bcell | GSE12603 | 21800500 | 21801662 | 1162 | 0 |
| hScc1 | Bcell | GSE12603 | 21813750 | 21814358 | 608 | 0 |
| hScc1 | CdLS | GSE12603 | 21800500 | 21801313 | 813 | 0 |
| hScc1 | G2 | GSE9613 | 21800500 | 21801157 | 657 | 0 |
| p130 | shRbSenescent | GSE19898 | 21813642 | 21814658 | 1016 | 0 |
Validated miRNA targets