AutismKB 2.0

Annotation Detail for TUBGCP4


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Basic Information Top
Gene Symbol:TUBGCP4 ( 76P,FLJ14797,GCP4 )
Gene Full Name: tubulin, gamma complex associated protein 4
Band: 15q15.3
Quick LinksEntrez ID:27229; OMIM: 609610; Uniprot ID:GCP4_HUMAN; ENSEMBL ID: ENSG00000137822; HGNC ID: 16691
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
No data
No data
Location(AA) Modification Resource
145Phosphoserine(ATM)HMM predict
211Phosphoserine(ATM)HMM predict
213N-linkedHMM predict
292N-linkedHMM predict
298Phosphoserine(PKG)HMM predict
437O-linkedHMM predict
481Phosphotyrosine(Jak)HMM predict
508N-linkedHMM predict
542Phosphoserine(ATM)HMM predict
549N-linkedHMM predict
592Phosphoserine(IKK)HMM predict
654Phosphotyrosine(Syk)HMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_014444
  • Location:chr15 41450604-41485529
  • strand:+
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 41449869 41451208 1339 66
PHF8 293TGSE20725 41449693 41451290 1597 113
PHF8 HeLaGSE20725 41449735 41451317 1582 79
hScc1 BcellGSE12603 41449804 41451106 1302 150
No data
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 41455678 41455900 222 0
CTCF CD4SISSRdata 41455678 41455900 222 0
Fos K562GSE19551 41470296 41470620 324 0
PHF8 Hs68minusFBSGSE20725 41450154 41451286 1132 0
Rb QuiescentGSE19898 41450497 41451077 580 0
Rb SenescentGSE19898 41450541 41451251 710 0
Rb shRbSenescenceGSE19898 41450867 41451040 173 0
p130 QuiescentGSE19898 41450804 41451154 350 0
Validated miRNA targets Top
Cis-Nats regulation Top
Cluster ID Plue Type Plus Gene Name Plus Chromosome Plus Start Plus End Overlap Length Minus Type Minus Gene Name Minus Chromosome Minus Star Minus End Type
8744 mRNA 76P chr15 41450604 41485530 1096 mRNA chr15 41482551 41485782Sense/Antisense (SA) pairs

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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