AutismKB 2.0

Annotation Detail for GLI1


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Basic Information Top
Gene Symbol:GLI1 ( GLI )
Gene Full Name: GLI family zinc finger 1
Band: 12q13.3
Quick LinksEntrez ID:2735; OMIM: 165220; Uniprot ID:GLI1_HUMAN; ENSEMBL ID: ENSG00000111087; HGNC ID: 4317
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
No data
No data
Location(AA) Modification Resource
24Phosphoserine(ATM)HMM predict
36Phosphoserine(ATM)HMM predict
53Phosphotyrosine(SRC)HMM predict
70Phosphoserine(CDC2)HMM predict
70Phosphoserine(CDK)HMM predict
78Phosphothreonine(PKC)HMM predict
84Phosphoserine(PKG)HMM predict
86Phosphoserine(ATM)HMM predict
86Phosphoserine(MAPK)HMM predict
102Phosphoserine(CDC2)HMM predict
116Phosphoserine(CDC2)HMM predict
116Phosphoserine(IKK)HMM predict
132O-linkedHMM predict
146Phosphoserine(CDC2)HMM predict
201Phosphoserine(ATM)HMM predict
203N-linkedHMM predict
331Phosphotyrosine(INSR)HMM predict
353N-linkedHMM predict
358N-linkedHMM predict
374Phosphothreonine(PKA)HMM predict
394Phosphothreonine(PKC)HMM predict
408Phosphoserine(IKK)HMM predict
408Phosphoserine(PKG)HMM predict
408O-linkedHMM predict
410O-linkedHMM predict
430Phosphothreonine(PKC)HMM predict
441O-linkedHMM predict
446Phosphoserine(IKK)HMM predict
447Phosphoserine(IKK)HMM predict
450Phosphoserine(CK1)HMM predict
453Phosphoserine(IKK)HMM predict
461Phosphothreonine(CK2)HMM predict
479Phosphoserine(CK2)HMM predict
480Phosphoserine(CK1)HMM predict
494Phosphothreonine(PKC)HMM predict
543Phosphoserine(CK1)HMM predict
544Phosphoserine(PKG)HMM predict
544Phosphoserine(CK2)HMM predict
544Phosphoserine(CK1)HMM predict
544Phosphoserine(IKK)HMM predict
546O-linkedHMM predict
548Phosphoserine(CK1)HMM predict
560Phosphoserine(PKG)HMM predict
560Phosphoserine(PKB)HMM predict
560Phosphoserine(IKK)HMM predict
560Phosphoserine(CAMK2)HMM predict
560Phosphoserine(PKA)HMM predict
563Phosphoserine(CDC2)HMM predict
569Phosphoserine(CDC2)HMM predict
569Phosphoserine(ATM)HMM predict
569O-linkedHMM predict
602O-linkedHMM predict
604O-linkedHMM predict
636Phosphothreonine(PKC)HMM predict
640Phosphoserine(PKB)HMM predict
640Phosphoserine(PKA)HMM predict
640Phosphoserine(CAMK2)HMM predict
640Phosphoserine(PKG)HMM predict
679Phosphotyrosine(Syk)HMM predict
686O-linkedHMM predict
691Phosphoserine(IKK)HMM predict
712Phosphoserine(IKK)HMM predict
721Phosphotyrosine(Syk)HMM predict
732Phosphotyrosine(INSR)HMM predict
771Phosphoserine(IKK)HMM predict
838O-linkedHMM predict
855O-linkedHMM predict
865Phosphotyrosine(Jak)HMM predict
865Phosphotyrosine(Abl)HMM predict
925Phosphotyrosine(SRC)HMM predict
934Phosphoserine(ATM)HMM predict
966O-linkedHMM predict
1018MethylarginineHMM predict
1060Phosphoserine(CDC2)HMM predict
1060Phosphoserine(IKK)HMM predict
1070O-linkedHMM predict
1074PhosphothreonineHMM predict
1074Phosphothreonine(CDK)HMM predict
1074Phosphothreonine(MAPK)HMM predict
1074Phosphothreonine(CDC2)HMM predict
1074O-linkedHMM predict
1078O-linkedHMM predict
1078Phosphoserine(ATM)HMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_005269
  • Location:chr12 56140200-56152311
  • strand:+
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 56138918 56140127 1209 678
hScc1 BcellGSE12603 56139169 56139674 505 779
hScc1 CdLSGSE12603 56139053 56139599 546 875
hScc1 G2GSE9613 56138951 56139788 837 831
No data
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 56142761 56143050 289 0
CTCF CD4SISSRdata 56142761 56143050 289 0
CTCF G2GSE9613 56142349 56143245 896 0
CTCF G2GSE9613 56147521 56147667 146 0
CTCF G2GSE9613 56150543 56151457 914 0
H3K27me3 colorectalcancer 56144801 56145442 641 0
Myc K562GSE19551 56142407 56143100 693 0
Rb GrowingGSE19898 56142783 56143010 227 0
hScc1 BcellGSE12603 56142568 56143172 604 0
hScc1 CdLSGSE12603 56141781 56143172 1391 0
hScc1 G2GSE9613 56142431 56143245 814 0
Validated miRNA targets Top
Micro RNA Name Stem Loop Name The chromosome that miRNA located Publication
hsa-let-7a hsa-let-7a-1 9 20216554
hsa-let-7a hsa-let-7a-2 11 20216554
hsa-let-7a hsa-let-7a-3 22 20216554
hsa-let-7a* hsa-let-7a-1 9 20216554
hsa-let-7a* hsa-let-7a-3 22 20216554
hsa-let-7b hsa-let-7b 22 20216554
hsa-let-7b* hsa-let-7b 22 20216554
hsa-let-7c hsa-let-7c 21 20216554
hsa-let-7c* hsa-let-7c 21 20216554
hsa-let-7d hsa-let-7d 9 20216554
hsa-let-7d* hsa-let-7d 9 20216554
hsa-let-7e hsa-let-7e 19 20216554
hsa-let-7e* hsa-let-7e 19 20216554
hsa-let-7f hsa-let-7f-1 9 20216554
hsa-let-7f hsa-let-7f-2 X 20216554
hsa-let-7f-1* hsa-let-7f-1 9 20216554
hsa-let-7f-2* hsa-let-7f-2 X 20216554
hsa-let-7g hsa-let-7g 3 20216554
hsa-let-7g* hsa-let-7g 3 20216554
hsa-let-7i hsa-let-7i 12 20216554
hsa-let-7i* hsa-let-7i 12 20216554
hsa-miR-125b hsa-mir-125b-1 11 18756266
hsa-miR-125b hsa-mir-125b-2 21 18756266
hsa-miR-125b hsa-mir-125b-1 11 20216554
hsa-miR-125b hsa-mir-125b-2 21 20216554
hsa-miR-126 hsa-mir-126 9 20216554
hsa-miR-126* hsa-mir-126 9 20216554
hsa-miR-141 hsa-mir-141 12 18698484
hsa-miR-141* hsa-mir-141 12 18698484
hsa-miR-15a hsa-mir-15a 13 20216554
hsa-miR-15a* hsa-mir-15a 13 20216554
hsa-miR-15b hsa-mir-15b 3 20216554
hsa-miR-15b* hsa-mir-15b 3 20216554
hsa-miR-16 hsa-mir-16-1 13 20216554
hsa-miR-16 hsa-mir-16-2 3 20216554
hsa-miR-200a hsa-mir-200a 1 18698484
hsa-miR-200a* hsa-mir-200a 1 18698484
hsa-miR-200b hsa-mir-200b 1 18698484
hsa-miR-200b* hsa-mir-200b 1 18698484
hsa-miR-200c hsa-mir-200c 12 18698484
hsa-miR-200c* hsa-mir-200c 12 18698484
hsa-miR-203 hsa-mir-203 14 20216554
hsa-miR-205 hsa-mir-205 1 18698484
hsa-miR-21 hsa-mir-21 17 20216554
hsa-miR-21* hsa-mir-21 17 20216554
hsa-miR-216a hsa-mir-216a 2 20216554
hsa-miR-217 hsa-mir-217 2 20216554
hsa-miR-23b hsa-mir-23b 9 20216554
hsa-miR-23b* hsa-mir-23b 9 20216554
hsa-miR-29a hsa-mir-29a 7 20564213
hsa-miR-29a* hsa-mir-29a 7 20564213
hsa-miR-29b hsa-mir-29b-1 7 20564213
hsa-miR-29b hsa-mir-29b-2 1 20564213
hsa-miR-29b-1* hsa-mir-29b-1 7 20564213
hsa-miR-29b-2* hsa-mir-29b-2 1 20564213
hsa-miR-29c hsa-mir-29c 1 20564213
hsa-miR-29c* hsa-mir-29c 1 20564213
hsa-miR-324-5p hsa-mir-324 17 18756266
hsa-miR-324-5p hsa-mir-324 17 20216554
hsa-miR-326 hsa-mir-326 11 18756266
hsa-miR-326 hsa-mir-326 11 20216554
hsa-miR-372 hsa-mir-372 19 20216554
hsa-miR-373 hsa-mir-373 19 20216554
hsa-miR-373* hsa-mir-373 19 20216554
hsa-miR-429 hsa-mir-429 1 18698484
No data
Cis-Nats regulation Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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