Annotation Detail for APOBEC3C
Basic Information Top
| Gene Symbol: | APOBEC3C ( APOBEC1L,ARDC2,ARDC4,ARP5,MGC19485,PBI,bK150C2.3 ) |
|---|---|
| Gene Full Name: | apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3C |
| Band: | 22q13.1 |
| Quick Links | Entrez ID:27350; OMIM: 607750; Uniprot ID:ABC3C_HUMAN; ENSEMBL ID: ENSG00000179750,ENSG00000244509; HGNC ID: 17353 |
| Relate to Another Database: | SFARIGene; denovo-db |
| No data |
| No data |
| Location(AA) | Modification | Resource |
|---|---|---|
| 31 | N-linked | HMM predict |
| 81 | Phosphoserine(CDK) | HMM predict |
| 92 | O-linked | HMM predict |
| 115 | N-linked | HMM predict |
| 139 | Phosphoserine(CK1) | HMM predict |
| 150 | Sulfotyrosine | HMM predict |
| 185 | Leucine | HMM predict |
- RefSeq ID: NM_014508
- Location:chr22 37740210-37744768
- strand:+
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | CD4 | GSE12889 | 37733665 | 37733905 | 240 | 6426 |
| CTCF | CD4 | SISSRdata | 37733665 | 37733905 | 240 | 6426 |
| LIN9 | S | GSE7516 | 37739705 | 37740463 | 758 | 127 |
| VDR | GM10855-Unstim | GSE22484 | 37739567 | 37740642 | 1075 | 106 |
| hScc1 | CdLS | GSE12603 | 37739815 | 37740463 | 648 | 72 |
| No data |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| Oct4 | hES | GSE21916 | 37743437 | 37744296 | 859 | 0 |
| PHF8 | 293T | GSE20725 | 37739986 | 37740539 | 553 | 0 |
| PHF8 | Hs68minusFBS | GSE20725 | 37739793 | 37740797 | 1004 | 0 |
| Rb | Quiescent | GSE19898 | 37740448 | 37740696 | 248 | 0 |
| Rb | Senescent | GSE19898 | 37740464 | 37740773 | 309 | 0 |
| hScc1 | Bcell | GSE12603 | 37739933 | 37740545 | 612 | 0 |
| hScc1 | Bcell | GSE12603 | 37743627 | 37743808 | 181 | 0 |
Cis-Nats regulation