AutismKB 2.0

Annotation Detail for GOLGA3


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Basic Information Top
Gene Symbol:GOLGA3 ( GCP170,MEA-2 )
Gene Full Name: golgin A3
Band: 12q24.33
Quick LinksEntrez ID:2802; OMIM: 602581; Uniprot ID:GOGA3_HUMAN; ENSEMBL ID: ENSG00000090615; HGNC ID: 4426
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
1N-acetylmethionine.
57Phosphoserine (By similarity).
389Phosphoserine.
392Phosphoserine.
393Phosphoserine.
395Phosphoserine.
399Phosphoserine.
528Phosphoserine.
983Phosphoserine.
Location(AA) Modifications Resource
389Phosphoserine.Swiss-Prot 53.0
392Phosphoserine.Swiss-Prot 53.0
393Phosphoserine.Swiss-Prot 53.0
395Phosphoserine.Swiss-Prot 53.0
398PhosphoserinePhospho.ELM 6.0
399Phosphoserine.Swiss-Prot 53.0
399PhosphoserinePhospho.ELM 6.0
528Phosphoserine.Swiss-Prot 53.0
528PhosphoserinePhospho.ELM 6.0
Location(AA) Modification Resource
18Phosphoserine(PKA)HMM predict
18Phosphoserine(ATM)HMM predict
18Phosphoserine(IKK)HMM predict
18Phosphoserine(CK1)HMM predict
53Phosphothreonine(PKC)HMM predict
80Phosphoserine(IKK)HMM predict
81O-linkedHMM predict
85O-linkedHMM predict
85O-linkedHMM predict
87Phosphoserine(MAPK)HMM predict
87Phosphoserine(CDK)HMM predict
87O-linkedHMM predict
87Phosphoserine(CDC2)HMM predict
111Phosphoserine(IKK)HMM predict
175Phosphoserine(CK1)HMM predict
175Phosphoserine(ATM)HMM predict
203Phosphothreonine(PKA)HMM predict
211Phosphoserine(PKC)HMM predict
237Phosphothreonine(PKC)HMM predict
238Phosphoserine(PKA)HMM predict
241Phosphoserine(PKC)HMM predict
268Phosphoserine(IKK)HMM predict
276N-linkedHMM predict
285O-linkedHMM predict
290Phosphoserine(ATM)HMM predict
299N-linkedHMM predict
313N-linkedHMM predict
318Phosphoserine(CK1)HMM predict
320Phosphotyrosine(INSR)HMM predict
321Phosphoserine(IKK)HMM predict
389Phosphoserine(PKG)HMM predict
389Phosphoserine(IKK)HMM predict
395O-linkedHMM predict
398Phosphoserine(CK2)HMM predict
425Phosphoserine(CK1)HMM predict
429Phosphoserine(ATM)HMM predict
467Phosphoserine(CK1)HMM predict
495N-linkedHMM predict
512Phosphotyrosine(Syk)HMM predict
564Phosphoserine(ATM)HMM predict
621Phosphoserine(ATM)HMM predict
693Phosphoserine(CK1)HMM predict
739Phosphoserine(IKK)HMM predict
807Phosphoserine(CK2)HMM predict
872Phosphothreonine(PKC)HMM predict
999Phosphotyrosine(INSR)HMM predict
1190Phosphoserine(CK1)HMM predict
1248Phosphoserine(ATM)HMM predict
1381Phosphothreonine(PKC)HMM predict
1390O-linkedHMM predict
1391O-linkedHMM predict
1392Phosphoserine(IKK)HMM predict
1392O-linkedHMM predict
1467O-linkedHMM predict
1469O-linkedHMM predict
1469Phosphoserine(MAPK)HMM predict
1469Phosphoserine(CDC2)HMM predict
1469Phosphoserine(IKK)HMM predict
1469Phosphoserine(CDK)HMM predict
1492Phosphoserine(CK1)HMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_005895
  • Location:chr12 131855567-131915360
  • strand:-
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 131914893 131916073 1180 123
ETS1 JurkatGSE17954 131915083 131916180 1097 271
FOXA1 MCF7GSE15244 131915233 131915773 540 143
KLF4 hESGSE17917 131915383 131915613 230 138
PHF8 293TGSE20725 131914950 131916515 1565 372
VDR GM10861-UnstimGSE22484 131914682 131916546 1864 254
hScc1 CdLSGSE12603 131915197 131916052 855 264
hScc1 G2GSE9613 131915005 131916073 1068 179
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CBP T30-glioblastomaGSE21026 131846505 131848270 1765 8180
CTCF CD4GSE12889 131855109 131855322 213 352
CTCF CD4SISSRdata 131855109 131855322 213 352
CTCF HelaGSE12889 131855134 131855375 241 313
CTCF G2GSE9613 131847720 131848392 672 7512
CTCF G2GSE9613 131848808 131849041 233 6643
CTCF G2GSE9613 131852122 131852291 169 3361
CTCF G2GSE9613 131855108 131855586 478 221
H3K4me2 HCT116GSE10453 131847720 131847882 162 7767
H3K4me3 colorectalcancer 131847720 131847882 162 7767
H3ac HepG2E 131847720 131848085 365 7665
NFkBII GM10847GSE19485 131847924 131849434 1510 6889
NFkBII GM12878GSE19485 131846332 131848178 1846 8313
NRSF pAbJurkat 131836114 131836520 406 19251
NRSF pAbJurkat 131845573 131845877 304 9843
NRSF pAbJurkat 131848027 131848392 365 7358
P300 T30-glioblastomaGSE21026 131846408 131848210 1802 8259
PHF8 293TGSE20725 131847844 131849329 1485 6981
PHF8 HeLaGSE20725 131847693 131849277 1584 7083
PHF8 Hs68plusFBSGSE20725 131846922 131849454 2532 7380
PolII HeLaGSE12783 131846852 131849400 2548 7442
Rb GrowingGSE19898 131848853 131849046 193 6618
Rb GrowingGSE19898 131853265 131853449 184 2211
Rb SenescentGSE19898 131847600 131847955 355 7790
hScc1 BcellGSE12603 131847720 131848323 603 7546
hScc1 CdLSGSE12603 131847720 131848392 672 7512
hScc1 CdLSGSE12603 131848808 131849041 233 6643
hScc1 CdLSGSE12603 131855108 131855403 295 312
hScc1 G2GSE9613 131855108 131855439 331 294
p130 QuiescentGSE19898 131848853 131849159 306 6562
p130 QuiescentGSE19898 131853275 131853446 171 2207
p130 SenescentGSE19898 131847737 131848023 286 7688
p130 SenescentGSE19898 131848683 131849279 596 6587
p130 shRbSenescentGSE19898 131848700 131849213 513 6611
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 131859884 131860098 214 0
CTCF G2GSE9613 131860943 131861103 160 0
CTCF G2GSE9613 131862454 131864607 2153 0
CTCF G2GSE9613 131866907 131867082 175 0
CTCF G2GSE9613 131867373 131867730 357 0
CTCF G2GSE9613 131869871 131870206 335 0
CTCF G2GSE9613 131870609 131871152 543 0
CTCF G2GSE9613 131873920 131874205 285 0
CTCF G2GSE9613 131875082 131876033 951 0
CTCF G2GSE9613 131879066 131879620 554 0
CTCF G2GSE9613 131883059 131883904 845 0
CTCF G2GSE9613 131884446 131885101 655 0
CTCF G2GSE9613 131885632 131885972 340 0
CTCF G2GSE9613 131887641 131888188 547 0
CTCF G2GSE9613 131890219 131890594 375 0
CTCF G2GSE9613 131891141 131892854 1713 0
CTCF G2GSE9613 131893592 131893876 284 0
CTCF G2GSE9613 131894586 131895483 897 0
CTCF G2GSE9613 131902897 131903523 626 0
CTCF G2GSE9613 131904359 131904607 248 0
CTCF G2GSE9613 131912498 131913341 843 0
FOXA1 DLD1GSE12801 131899789 131900150 361 0
FOXA1 MCF7GSE15244 131887641 131887824 183 0
FOXA1 MCF7GSE15244 131913851 131914764 913 0
GABP HelaGSE8489 131913093 131914920 1827 0
GABP k562GSE8489 131912160 131915089 2929 0
H3K4me3 colorectalcancer 131914210 131914764 554 0
H3ac HepG2E 131912238 131913193 955 0
H3ac HepG2E 131913482 131915041 1559 0
NRSF pAbJurkat 131873920 131874205 285 0
NRSF pAbJurkat 131874532 131876033 1501 0
NRSF pAbJurkat 131879029 131880320 1291 0
NRSF pAbJurkat 131902897 131903261 364 0
NRSF pAbJurkat 131904043 131904607 564 0
P300 T0-glioblastomaGSE21026 131899208 131900264 1056 0
P300 T30-glioblastomaGSE21026 131899073 131900076 1003 0
RARG MCF7GSE15244 131913696 131914661 965 0
Rb shRbSenescenceGSE19898 131871370 131871575 205 0
TAF HelaGSE8489 131914309 131914861 552 0
TFAP2C MCF7GSE21234 131863477 131863925 448 0
VDR GM10861-stimGSE22484 131914058 131916411 2353 0
hScc1 BcellGSE12603 131862917 131863278 361 0
hScc1 BcellGSE12603 131866907 131867120 213 0
hScc1 BcellGSE12603 131874661 131875082 421 0
hScc1 BcellGSE12603 131878878 131880294 1416 0
hScc1 BcellGSE12603 131883023 131883724 701 0
hScc1 BcellGSE12603 131888500 131888711 211 0
hScc1 BcellGSE12603 131891687 131892341 654 0
hScc1 BcellGSE12603 131906208 131906379 171 0
hScc1 G2GSE9613 131888537 131888711 174 0
p130 shRbSenescentGSE19898 131871319 131871605 286 0
Validated miRNA targets Top
Cis-Nats regulation Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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