AutismKB 2.0

Annotation Detail for GOLGB1


View Evidences View Variants View Annotations
Basic Information Top
Gene Symbol:GOLGB1 ( GCP,GCP372,GIANTIN,GOLIM1 )
Gene Full Name: golgin B1
Band: 3q13.33
Quick LinksEntrez ID:2804; OMIM: 602500; Uniprot ID:GOGB1_HUMAN; ENSEMBL ID: ENSG00000173230; HGNC ID: 4429
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
6Phosphoserine.
17Phosphoserine.
38Phosphoserine.
45Phosphothreonine.
46Phosphothreonine.
967Phosphoserine.
2872Phosphoserine.
Location(AA) Modifications Resource
Location(AA) Modification Resource
17Phosphoserine(CK2)HMM predict
43N-linkedHMM predict
44N-linkedHMM predict
110Phosphotyrosine(INSR)HMM predict
139Phosphoserine(CK1)HMM predict
139Phosphoserine(CK2)HMM predict
207Phosphoserine(ATM)HMM predict
312PhosphothreonineHMM predict
334Phosphoserine(PKG)HMM predict
364Phosphoserine(PKG)HMM predict
364Phosphoserine(CK1)HMM predict
450Phosphoserine(ATM)HMM predict
453Phosphoserine(IKK)HMM predict
515N-linkedHMM predict
538Phosphoserine(CK2)HMM predict
539Phosphoserine(CK1)HMM predict
539Phosphoserine(IKK)HMM predict
539Phosphoserine(PKB)HMM predict
539PhosphoserineHMM predict
553Phosphoserine(ATM)HMM predict
631Phosphoserine(CK1)HMM predict
649Phosphoserine(CK1)HMM predict
653Phosphoserine(CK1)HMM predict
734N-linkedHMM predict
735N-linkedHMM predict
786Phosphoserine(ATM)HMM predict
838Phosphoserine(IKK)HMM predict
869Phosphoserine(ATM)HMM predict
963Phosphotyrosine(INSR)HMM predict
963Phosphotyrosine(Syk)HMM predict
1023Phosphoserine(CK2)HMM predict
1098N-linkedHMM predict
1185Phosphothreonine(PKC)HMM predict
1212Phosphotyrosine(EGFR)HMM predict
1256Phosphoserine(IKK)HMM predict
1259Phosphoserine(CK1)HMM predict
1260Phosphothreonine(CDK)HMM predict
1358Phosphothreonine(PKC)HMM predict
1377Phosphoserine(CK1)HMM predict
1377Phosphoserine(ATM)HMM predict
1499N-linkedHMM predict
1507Phosphoserine(CK1)HMM predict
1562N-linkedHMM predict
1571Phosphoserine(CK1)HMM predict
1660Phosphothreonine(PKC)HMM predict
1747Phosphoserine(CK1)HMM predict
1751Phosphoserine(CK1)HMM predict
1753Phosphoserine(CK1)HMM predict
1766N-linkedHMM predict
1772N-linkedHMM predict
1781N-linkedHMM predict
1784N-linkedHMM predict
1812O-linkedHMM predict
1817O-linkedHMM predict
1830Phosphoserine(CK1)HMM predict
1831Phosphoserine(CK2)HMM predict
1879Phosphothreonine(CK2)HMM predict
2003N-linkedHMM predict
2270Phosphothreonine(PKC)HMM predict
2291Phosphoserine(ATM)HMM predict
2303Phosphoserine(ATM)HMM predict
2356Phosphotyrosine(EGFR)HMM predict
2418Phosphoserine(CK1)HMM predict
2418Phosphoserine(CK2)HMM predict
2418Phosphoserine(ATM)HMM predict
2467Phosphoserine(CK1)HMM predict
2569Phosphotyrosine(Syk)HMM predict
2579PhosphoserineHMM predict
2612Phosphoserine(ATM)HMM predict
2650Phosphoserine(CDC2)HMM predict
2651Phosphoserine(ATM)HMM predict
2696N-linkedHMM predict
2741Phosphoserine(IKK)HMM predict
2793N-linkedHMM predict
2794PhosphoserineHMM predict
2798N-linkedHMM predict
2799Phosphoserine(CK1)HMM predict
2812Phosphoserine(CK1)HMM predict
2828Phosphotyrosine(Jak)HMM predict
2828Phosphotyrosine(Syk)HMM predict
2858Phosphoserine(CK2)HMM predict
2870O-linkedHMM predict
2871O-linkedHMM predict
2872O-linkedHMM predict
2872Phosphoserine(CDC2)HMM predict
2872Phosphoserine(MAPK)HMM predict
2884Phosphoserine(CK1)HMM predict
2904Phosphotyrosine(Jak)HMM predict
2924Phosphotyrosine(EGFR)HMM predict
2942N-linkedHMM predict
2994O-linkedHMM predict
2994Phosphoserine(CK1)HMM predict
2995Phosphoserine(CK1)HMM predict
2996Phosphoserine(CK1)HMM predict
2996Phosphoserine(ATM)HMM predict
2996Phosphoserine(IKK)HMM predict
3010Phosphoserine(CAMK2)HMM predict
3010Phosphoserine(IKK)HMM predict
3014O-linkedHMM predict
3016Phosphoserine(CDC2)HMM predict
3016Phosphoserine(CDK)HMM predict
3016Phosphoserine(IKK)HMM predict
3083SulfotyrosineHMM predict
3172Phosphoserine(CK2)HMM predict
3230S-palmitoylHMM predict
3246MethionineHMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_004487
  • Location:chr3 122865639-122951291
  • strand:-
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
ETS1 JurkatGSE17954 122950762 122952109 1347 144
Fos K562GSE19551 122950932 122951673 741 11
GABP k562GSE8489 122951149 122952254 1105 410
P300 T30-glioblastomaGSE21026 122950705 122951905 1200 14
RARA MCF7GSE15244 122950443 122952254 1811 57
No data
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 122950824 122951550 726 0
FOXA1 MCF7GSE15244 122950188 122952230 2042 0
H3K4me2 HCT116GSE10453 122949972 122950544 572 0
H3K4me3 colorectalcancer 122949972 122950982 1010 0
H3ac HepG2E 122949972 122951691 1719 0
LIN9 SGSE7516 122950794 122951443 649 0
Oct1 H2O2-HelaGSE14283 122920191 122920234 43 0
Oct1 HelaGSE14283 122883878 122883906 28 0
Oct1 HelaGSE14283 122920191 122920234 43 0
PHF8 HeLaGSE20725 122950406 122951932 1526 0
PHF8 Hs68plusFBSGSE20725 122950299 122952178 1879 0
RARG MCF7GSE15244 122950408 122952122 1714 0
USF2 HepG2E 122950950 122951593 643 0
VDR GM10855-stimGSE22484 122925084 122926893 1809 0
hScc1 BcellGSE12603 122950824 122951417 593 0
p130 shRbQuiescentGSE19898 122950300 122951413 1113 0
p63 keratinocytesGSE17611 122932572 122933271 699 0
Validated miRNA targets Top
Cis-Nats regulation Top
Cluster ID Plue Type Plus Gene Name Plus Chromosome Plus Start Plus End Overlap Length Minus Type Minus Gene Name Minus Chromosome Minus Star Minus End Type
18577 mRNA chr3 122950821 122952719 124 mRNA GOLGB1 chr3 122865639 122951292Sense/Antisense (SA) pairs

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


Copyright © 2017, Center for Bioinformatics , Peking University | All Rights Reserved