Annotation Detail for GPD1
Basic Information Top
| Gene Symbol: | GPD1 ( FLJ26652 ) |
|---|---|
| Gene Full Name: | glycerol-3-phosphate dehydrogenase 1 (soluble) |
| Band: | 12q13.12 |
| Quick Links | Entrez ID:2819; OMIM: 138420; Uniprot ID:GPDA_HUMAN; ENSEMBL ID: ENSG00000167588; HGNC ID: 4455 |
| Relate to Another Database: | SFARIGene; denovo-db |
- RefSeq ID: NM_005276
- Location:chr12 48784067-48791359
- strand:+
| No data |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | CD4 | GSE12889 | 48791510 | 48791999 | 489 | 395 |
| CTCF | CD4 | SISSRdata | 48791510 | 48791999 | 489 | 395 |
| CTCF | G2 | GSE9613 | 48790507 | 48792697 | 2190 | 243 |
| hScc1 | Bcell | GSE12603 | 48791385 | 48791867 | 482 | 267 |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | G2 | GSE9613 | 48784690 | 48785056 | 366 | 0 |
| CTCF | G2 | GSE9613 | 48788584 | 48788741 | 157 | 0 |
| FOXA1 | MCF7 | GSE15244 | 48786946 | 48787327 | 381 | 0 |
| H3ac | HepG2 | E | 48785727 | 48786265 | 538 | 0 |
| H3ac | HepG2 | E | 48789239 | 48789919 | 680 | 0 |
| TFAP2C | MCF7 | GSE21234 | 48790207 | 48791254 | 1047 | 0 |
| p130 | shRbSenescent | GSE19898 | 48790805 | 48790996 | 191 | 0 |
| Micro RNA Name | Stem Loop Name | The chromosome that miRNA located | Publication |
|---|---|---|---|
| hsa-let-7b | hsa-let-7b | 22 | 15131085 |
| hsa-let-7b* | hsa-let-7b | 22 | 15131085 |
| hsa-let-7e | hsa-let-7e | 19 | 15131085 |
| hsa-let-7e* | hsa-let-7e | 19 | 15131085 |
| hsa-miR-103 | hsa-mir-103-2 | 20 | 15131085 |
| hsa-miR-103 | hsa-mir-103-1 | 5 | 15131085 |
| hsa-miR-141 | hsa-mir-141 | 12 | 15131085 |
| hsa-miR-141* | hsa-mir-141 | 12 | 15131085 |
| hsa-miR-145 | hsa-mir-145 | 5 | 15131085 |
| hsa-miR-145* | hsa-mir-145 | 5 | 15131085 |
| hsa-miR-15a | hsa-mir-15a | 13 | 15131085 |
| hsa-miR-15a* | hsa-mir-15a | 13 | 15131085 |
| hsa-miR-15b | hsa-mir-15b | 3 | 15131085 |
| hsa-miR-15b* | hsa-mir-15b | 3 | 15131085 |
| hsa-miR-16 | hsa-mir-16-1 | 13 | 15131085 |
| hsa-miR-16 | hsa-mir-16-2 | 3 | 15131085 |
| hsa-miR-199b-3p | hsa-mir-199b | 9 | 15131085 |
| hsa-miR-199b-5p | hsa-mir-199b | 9 | 15131085 |
| hsa-miR-23a | hsa-mir-23a | 19 | 15131085 |
| hsa-miR-23a* | hsa-mir-23a | 19 | 15131085 |
| hsa-miR-24 | hsa-mir-24-1 | 9 | 15131085 |
| hsa-miR-24 | hsa-mir-24-2 | 19 | 15131085 |
| ID in Tarbase | Data Type | Support Type | miRNA | Gene | Direct Support | Publication |
|---|---|---|---|---|---|---|
| 225 | Unknown | FALSE | miR-103 | GPD1 | in vitro reporter gene assay (Luciferase) | 15131085 |
| Ensembl | Protein Type | Differentially expressed in | Pathology or Event | Mis Regulation | Gene Expression | Tumour Involvement |
| ENSG00000167588 | n_a | n_a | n_a | n_a | n_a |
Cis-Nats regulation