AutismKB 2.0

Annotation Detail for SLCO3A1


View Evidences View Variants View Annotations
Basic Information Top
Gene Symbol:SLCO3A1 ( FLJ40478,OATP-D,OATP3A1,OATPD,SLC21A11 )
Gene Full Name: solute carrier organic anion transporter family, member 3A1
Band: 15q26.1
Quick LinksEntrez ID:28232; OMIM: 612435; Uniprot ID:SO3A1_HUMAN; ENSEMBL ID: ENSG00000176463; HGNC ID: 10952
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
153N-linked (GlcNAc...) (Potential).
169N-linked (GlcNAc...) (Potential).
381N-linked (GlcNAc...) (Potential).
457N-linked (GlcNAc...) (Potential).
502N-linked (GlcNAc...) (Potential).
505N-linked (GlcNAc...) (Potential).
519N-linked (GlcNAc...) (Potential).
Location(AA) Modifications Resource
153N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
169N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
381N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
457N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
502N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
505N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
519N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
686N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
Location(AA) Modification Resource
66Phosphothreonine(PKC)HMM predict
102MethylarginineHMM predict
153N-linkedHMM predict
169N-linkedHMM predict
174N-linkedHMM predict
211Phosphoserine(PKA)HMM predict
293Phosphoserine(ATM)HMM predict
309Phosphotyrosine(Jak)HMM predict
309Phosphotyrosine(SRC)HMM predict
309Phosphotyrosine(Syk)HMM predict
381N-linkedHMM predict
384O-linkedHMM predict
457N-linkedHMM predict
469Phosphoserine(IKK)HMM predict
502N-linkedHMM predict
505N-linkedHMM predict
519N-linkedHMM predict
544S-palmitoylHMM predict
686N-linkedHMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_013272
  • Location:chr15 90197949-90507779
  • strand:+
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 90193956 90194230 274 3857
CTCF CD4SISSRdata 90193956 90194230 274 3857
CTCF G2GSE9613 90193742 90194296 554 3931
CTCF G2GSE9613 90197003 90198490 1487 203
Nanog hESGSE18292 90183227 90183637 410 14518
Nanog hESGSE18292 90193824 90194329 505 3873
Sox2 hESGSE18292 90183381 90183594 213 14462
TFAP2C MCF7GSE21234 90189081 90189506 425 8656
hScc1 BcellGSE12603 90197326 90198490 1164 42
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
Oct1 HelaGSE14283 90522125 90522156 31 14361
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CBP T30-glioblastomaGSE21026 90309790 90310904 1114 0
CTCF CD4GSE12889 90441913 90442122 209 0
CTCF CD4SISSRdata 90441913 90442122 209 0
CTCF G2GSE9613 90200164 90200631 467 0
CTCF G2GSE9613 90238725 90239118 393 0
CTCF G2GSE9613 90291097 90291505 408 0
CTCF G2GSE9613 90318354 90318934 580 0
CTCF G2GSE9613 90421596 90421951 355 0
CTCF G2GSE9613 90422448 90423514 1066 0
CTCF G2GSE9613 90426191 90426962 771 0
CTCF G2GSE9613 90435458 90435832 374 0
FoxA1 MCF7MACSdata 90211323 90211518 195 0
H3K4me3 colorectalcancer 90198755 90199491 736 0
Myc K562GSE19551 90487953 90488462 509 0
Myc hESGSE17917 90211344 90211732 388 0
NRSF mAbJurkat 90485252 90485466 214 0
Nanog hESGSE18292 90245660 90246058 398 0
Nanog hESGSE18292 90271834 90272185 351 0
Nanog hESGSE18292 90375406 90375730 324 0
Oct1 H2O2-HelaGSE14283 90234842 90234873 31 0
Oct1 H2O2-HelaGSE14283 90397505 90397538 33 0
Oct1 HelaGSE14283 90234840 90234873 33 0
Oct1 HelaGSE14283 90286445 90286481 36 0
Oct1 HelaGSE14283 90332132 90332163 31 0
Oct4 hESGSE21916 90225864 90226558 694 0
P300 T30-glioblastomaGSE21026 90286890 90287867 977 0
P300 T30-glioblastomaGSE21026 90309623 90311170 1547 0
P300 T30-glioblastomaGSE21026 90413558 90414551 993 0
RARA MCF7GSE15244 90309825 90311013 1188 0
Rb GrowingGSE19898 90421625 90421986 361 0
Rb QuiescentGSE19898 90287120 90287242 122 0
Rb SenescentGSE19898 90421688 90421976 288 0
STAT1 IFNSISSRdata 90426525 90426851 326 0
Sox2 hESGSE18292 90226127 90226489 362 0
TFAP2C MCF7GSE21234 90284977 90285825 848 0
TFAP2C MCF7GSE21234 90309713 90310678 965 0
VDR GM10861-stimGSE22484 90439594 90440793 1199 0
hScc1 BcellGSE12603 90426361 90426962 601 0
hScc1 BcellGSE12603 90441504 90442280 776 0
hScc1 BcellGSE12603 90455184 90455453 269 0
hScc1 CdLSGSE12603 90426191 90427000 809 0
hScc1 CdLSGSE12603 90441681 90442383 702 0
p130 shRbQuiescentGSE19898 90287229 90287566 337 0
p63 keratinocytesGSE17611 90336929 90337845 916 0
Validated miRNA targets Top
Cis-Nats regulation Top
Cluster ID Plue Type Plus Gene Name Plus Chromosome Plus Start Plus End Overlap Length Minus Type Minus Gene Name Minus Chromosome Minus Star Minus End Type
9301 mRNA SLCO3A1 chr15 90197949 90507783 14195 EST chr15 90493588 90675280 Non-exonic Bidirectional (NOB) pairs

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


Copyright © 2017, Center for Bioinformatics , Peking University | All Rights Reserved