AutismKB 2.0

Annotation Detail for SLCO1B3


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Basic Information Top
Gene Symbol:SLCO1B3 ( LST-3TM13,LST3,OATP1B3,OATP8,SLC21A8 )
Gene Full Name: solute carrier organic anion transporter family, member 1B3
Band: 12p12.2
Quick LinksEntrez ID:28234; OMIM: 605495; Uniprot ID:SO1B3_HUMAN; ENSEMBL ID: ENSG00000111700; HGNC ID: 10961
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
134N-linked (GlcNAc...) (Potential).
145N-linked (GlcNAc...) (Potential).
151N-linked (GlcNAc...) (Potential).
445N-linked (GlcNAc...) (Potential).
503N-linked (GlcNAc...) (Potential).
516N-linked (GlcNAc...) (Potential).
Location(AA) Modifications Resource
8N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
134N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
145N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
151N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
306N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
310N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
317N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
321N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
445N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
503N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
516N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
Location(AA) Modification Resource
8N-linkedHMM predict
13Phosphoserine(CK2)HMM predict
21Phosphothreonine(PKA)HMM predict
21Phosphothreonine(PKC)HMM predict
108Phosphoserine(IKK)HMM predict
130N-linkedHMM predict
134N-linkedHMM predict
135Phosphoserine(CK1)HMM predict
137Phosphoserine(CK1)HMM predict
138O-linkedHMM predict
141O-linkedHMM predict
145N-linkedHMM predict
151N-linkedHMM predict
293Phosphoserine(PKG)HMM predict
306N-linkedHMM predict
310N-linkedHMM predict
313N-linkedHMM predict
317N-linkedHMM predict
321N-linkedHMM predict
367SulfotyrosineHMM predict
445N-linkedHMM predict
446N-linkedHMM predict
485S-palmitoylHMM predict
503N-linkedHMM predict
537Phosphotyrosine(Jak)HMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_019844
  • Location:chr12 20854904-20960922
  • strand:+
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 20842753 20843114 361 11971
ER Fulvestrant-MCF7GSE14664 20853902 20853944 42 982
Fos K562GSE19551 20851117 20851371 254 3661
Nanog ESGSE20650 20837205 20837610 405 17497
Oct1 HelaGSE14283 20840948 20840977 29 13942
Oct1 HelaGSE14283 20853917 20853944 27 974
hScc1 G2GSE9613 20842753 20843114 361 11971
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
ER E2-MCF7GSE14664 20978306 20978345 39 17403
Oct1 H2O2-HelaGSE14283 20966481 20966509 28 5573
Oct1 H2O2-HelaGSE14283 20978312 20978345 33 17406
Oct1 HelaGSE14283 20966481 20966516 35 5576
No data
Validated miRNA targets Top
Cis-Nats regulation Top

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  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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