Annotation Detail for CDH20
Basic Information Top
| Gene Symbol: | CDH20 ( CDH7L3,Cdh7,FLJ37047 ) |
|---|---|
| Gene Full Name: | cadherin 20, type 2 |
| Band: | 18q21.33 |
| Quick Links | Entrez ID:28316; OMIM: 605807; Uniprot ID:CAD20_HUMAN; ENSEMBL ID: ENSG00000101542; HGNC ID: 1760 |
| Relate to Another Database: | SFARIGene; denovo-db |
| Location(AA) | Modification | |
|---|---|---|
| 261 | N-linked (GlcNAc...) (Potential). | |
| 420 | N-linked (GlcNAc...) (Potential). | |
| 461 | N-linked (GlcNAc...) (Potential). | |
| 542 | N-linked (GlcNAc...) (Potential). | |
| Location(AA) | Modifications | Resource |
|---|---|---|
| 261 | N-linked (GlcNAc...) (Potential). | Swiss-Prot 53.0 |
| 420 | N-linked (GlcNAc...) (Potential). | Swiss-Prot 53.0 |
| 461 | N-linked (GlcNAc...) (Potential). | Swiss-Prot 53.0 |
| 542 | N-linked (GlcNAc...) (Potential). | Swiss-Prot 53.0 |
| Location(AA) | Modification | Resource |
|---|---|---|
| 34 | O-linked | HMM predict |
| 36 | Phosphothreonine(MAPK) | HMM predict |
| 38 | Phosphothreonine(MAPK) | HMM predict |
| 38 | Phosphothreonine(CDC2) | HMM predict |
| 170 | Phosphotyrosine(Jak) | HMM predict |
| 178 | O-linked | HMM predict |
| 197 | Phosphotyrosine(INSR) | HMM predict |
| 215 | Phosphoserine(ATM) | HMM predict |
| 237 | Phosphotyrosine(Jak) | HMM predict |
| 238 | Phosphotyrosine(Syk) | HMM predict |
| 261 | N-linked | HMM predict |
| 448 | Phosphothreonine(PKC) | HMM predict |
| 471 | N-linked | HMM predict |
| 498 | Phosphotyrosine(EGFR) | HMM predict |
| 530 | Phosphotyrosine(Syk) | HMM predict |
| 542 | N-linked | HMM predict |
| 548 | N-linked | HMM predict |
| 557 | Phosphothreonine(PKC) | HMM predict |
| 585 | O-linked | HMM predict |
| 585 | Phosphoserine(CK1) | HMM predict |
| 611 | Phosphotyrosine(INSR) | HMM predict |
| 611 | Phosphotyrosine(SRC) | HMM predict |
| 719 | N-linked | HMM predict |
| 721 | O-linked | HMM predict |
| 747 | Phosphothreonine(PKC) | HMM predict |
| 759 | Phosphoserine(IKK) | HMM predict |
| 767 | O-linked | HMM predict |
| 768 | Phosphoserine(CK2) | HMM predict |
| 768 | Phosphoserine(CK2) | HMM predict |
| 768 | Phosphoserine(CK1) | HMM predict |
- RefSeq ID: NM_031891
- Location:chr18 57308754-57373344
- strand:+
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| Nanog | ES | GSE20650 | 57301373 | 57301849 | 476 | 7144 |
| Oct1 | Hela | GSE14283 | 57306369 | 57306401 | 32 | 2370 |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| Oct1 | Hela | GSE14283 | 57380846 | 57380883 | 37 | 7520 |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CBP | T0-glioblastoma | GSE21026 | 57318124 | 57318531 | 407 | 0 |
| CTCF | CD4 | GSE12889 | 57320787 | 57320996 | 209 | 0 |
| CTCF | CD4 | SISSRdata | 57320787 | 57320996 | 209 | 0 |
| CTCF | G2 | GSE9613 | 57320750 | 57321034 | 284 | 0 |
| hScc1 | Bcell | GSE12603 | 57320610 | 57321034 | 424 | 0 |
| hScc1 | Bcell | GSE12603 | 57369702 | 57369952 | 250 | 0 |
| hScc1 | CdLS | GSE12603 | 57320501 | 57321034 | 533 | 0 |
| hScc1 | G2 | GSE9613 | 57320574 | 57321171 | 597 | 0 |
| p63 | keratinocytes | GSE17611 | 57359608 | 57360751 | 1143 | 0 |
Validated miRNA targets