AutismKB 2.0

Annotation Detail for KCTD21


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Basic Information Top
Gene Symbol:KCTD21 ( - )
Gene Full Name: potassium channel tetramerisation domain containing 21
Band: 11q14.1
Quick LinksEntrez ID:283219; OMIM: NA; Uniprot ID:KCD21_HUMAN; ENSEMBL ID: ENSG00000188997; HGNC ID: 27452
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
No data
No data
Location(AA) Modification Resource
20O-linkedHMM predict
39Phosphothreonine(PKC)HMM predict
87Phosphotyrosine(Syk)HMM predict
113N-linkedHMM predict
117N-linkedHMM predict
122Phosphothreonine(PKC)HMM predict
170N-linkedHMM predict
200Phosphotyrosine(Syk)HMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_001029859
  • Location:chr11 77559948-77577311
  • strand:-
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
ER Fulvestrant-MCF7GSE14664 77587452 77587486 34 10158
ETS1 JurkatGSE17954 77576857 77577868 1011 51
FOXA1 MCF7GSE15244 77579618 77580066 448 2531
H3ac HepG2E 77578280 77580506 2226 2082
H3ac HepG2E 77583064 77584253 1189 6347
LIN9 SGSE7516 77584862 77585039 177 7639
NRSF pAbJurkat 77576916 77577734 818 14
NRSF pAbJurkat 77584116 77584407 291 6950
Oct1 HelaGSE14283 77578558 77578634 76 1285
P300 T0-glioblastomaGSE21026 77577024 77577930 906 166
hScc1 BcellGSE12603 77585158 77585531 373 8033
p130 QuiescentGSE19898 77577303 77577533 230 107
p130 QuiescentGSE19898 77577626 77577780 154 392
p130 SenescentGSE19898 77577353 77577550 197 140
p130 SenescentGSE19898 77577638 77577899 261 457
p130 shRbSenescentGSE19898 77577684 77577969 285 515
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
ER MCF7GSE19013 77544650 77545615 965 14816
FOXA1 MCF7GSE15244 77545063 77545631 568 14602
FOXA1 MCF7GSE15244 77556951 77557238 287 2854
FoxA1 MCF7MACSdata 77544632 77544986 354 15140
FoxA1 MCF7MACSdata 77545022 77545427 405 14724
GATA3 MCF7GSE15244 77545063 77545418 355 14708
H3ac HepG2E 77556951 77557612 661 2667
Oct1 H2O2-HelaGSE14283 77555710 77555738 28 4225
Oct1 HelaGSE14283 77555709 77555738 29 4225
RARA MCF7GSE15244 77545063 77545631 568 14602
RARA MCF7GSE15244 77556951 77557274 323 2836
RARG MCF7GSE15244 77545063 77545631 568 14602
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
H3K4me2 HCT116GSE10453 77575639 77576536 897 0
H3ac HepG2E 77575393 77576983 1590 0
Oct1 HelaGSE14283 77560574 77560612 38 0
Oct1 HelaGSE14283 77564162 77564203 41 0
Oct1 HelaGSE14283 77565024 77565053 29 0
Oct1 HelaGSE14283 77576269 77576304 35 0
Rb SenescentGSE19898 77576631 77577226 595 0
p130 shRbSenescentGSE19898 77576657 77577641 984 0
Validated miRNA targets Top
Cis-Nats regulation Top
Cluster ID Plue Type Plus Gene Name Plus Chromosome Plus Start Plus End Overlap Length Minus Type Minus Gene Name Minus Chromosome Minus Star Minus End Type
4942 mRNA LOC387793 chr11 77562468 77564017 809 HTC LOC283219 chr11 77559945 77577312Sense/Antisense (SA) pairs

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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