AutismKB 2.0

Annotation Detail for GAS2L3


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Basic Information Top
Gene Symbol:GAS2L3 ( - )
Gene Full Name: growth arrest-specific 2 like 3
Band: 12q23.1
Quick LinksEntrez ID:283431; OMIM: NA; Uniprot ID:GA2L3_HUMAN; ENSEMBL ID: ENSG00000139354; HGNC ID: 27475
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
438Phosphoserine.
441Phosphothreonine.
570Phosphoserine.
Location(AA) Modifications Resource
Location(AA) Modification Resource
16Phosphoserine(MAPK)HMM predict
16Phosphoserine(CDK)HMM predict
16PhosphoserineHMM predict
16Phosphoserine(CDC2)HMM predict
16Phosphoserine(ATM)HMM predict
19Phosphoserine(IKK)HMM predict
19Phosphoserine(CDC2)HMM predict
19Phosphoserine(CDK)HMM predict
22Phosphothreonine(MAPK)HMM predict
193N-linkedHMM predict
202Phosphoserine(CK1)HMM predict
301N-linkedHMM predict
307Phosphoserine(IKK)HMM predict
307Phosphoserine(CDC2)HMM predict
307Phosphoserine(CDK)HMM predict
311Phosphothreonine(MAPK)HMM predict
311Phosphothreonine(CDK)HMM predict
311Phosphothreonine(CDC2)HMM predict
338Phosphoserine(IKK)HMM predict
376Phosphoserine(IKK)HMM predict
376Phosphoserine(MAPK)HMM predict
376Phosphoserine(CDC2)HMM predict
399Phosphoserine(IKK)HMM predict
415N-linkedHMM predict
418O-linkedHMM predict
418Phosphoserine(CDC2)HMM predict
437PhosphoserineHMM predict
438Phosphoserine(CDC2)HMM predict
441Phosphothreonine(MAPK)HMM predict
441Phosphothreonine(CDC2)HMM predict
493Phosphoserine(IKK)HMM predict
494N-linkedHMM predict
522Phosphothreonine(PKC)HMM predict
528O-linkedHMM predict
531O-linkedHMM predict
537Phosphoserine(ATM)HMM predict
540O-linkedHMM predict
567O-linkedHMM predict
567Phosphoserine(IKK)HMM predict
570Phosphoserine(CDC2)HMM predict
575Phosphothreonine(PKC)HMM predict
593N-linkedHMM predict
603Phosphoserine(CDC2)HMM predict
607Phosphoserine(CDC2)HMM predict
611Phosphothreonine(MAPK)HMM predict
617O-linkedHMM predict
621Phosphoserine(IKK)HMM predict
621Phosphoserine(CDC2)HMM predict
622O-linkedHMM predict
625O-linkedHMM predict
634Phosphothreonine(PKC)HMM predict
634O-linkedHMM predict
638Phosphoserine(ATM)HMM predict
641Phosphoserine(PKC)HMM predict
641Phosphoserine(IKK)HMM predict
648O-linkedHMM predict
673Phosphothreonine(PKC)HMM predict
683Phosphotyrosine(Syk)HMM predict
683SulfotyrosineHMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_174942
  • Location:chr12 99491619-99542813
  • strand:+
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
LIN9 G0GSE7516 99491157 99492046 889 18
PHF8 293TGSE20725 99491105 99491968 863 83
PHF8 HeLaGSE20725 99491103 99491996 893 70
p130 SenescentGSE19898 99491310 99491799 489 65
p130 shRbSenescentGSE19898 99491318 99491783 465 69
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
Oct1 H2O2-HelaGSE14283 99542997 99543024 27 197
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 99491295 99492148 853 0
FOXA1 MCF7GSE15244 99492400 99492801 401 0
H3K4me2 HCT116GSE10453 99492400 99492837 437 0
H3K4me3 colorectalcancer 99492180 99492901 721 0
H3ac HepG2E 99492076 99493115 1039 0
Oct1 HelaGSE14283 99507085 99507116 31 0
PHF8 Hs68minusFBSGSE20725 99491126 99492186 1060 0
RARA MCF7GSE15244 99492288 99492901 613 0
RARG MCF7GSE15244 99492400 99492901 501 0
RNAII Tamoxifen-MCF7GSE14664 99524729 99524827 98 0
TFAP2C MCF7GSE21234 99491597 99491981 384 0
Validated miRNA targets Top
Cis-Nats regulation Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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