AutismKB 2.0

Annotation Detail for C12orf40


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Basic Information Top
Gene Symbol:C12orf40 ( FLJ40126 )
Gene Full Name: chromosome 12 open reading frame 40
Band: 12q12
Quick LinksEntrez ID:283461; OMIM: NA; Uniprot ID:CL040_HUMAN; ENSEMBL ID: ENSG00000180116; HGNC ID: 26846
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_001031748
  • Location:chr12 38306238-38401980
  • strand:+
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
LIN54 SGSE7516 38304825 38305002 177 1325
No data
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
Oct1 H2O2-HelaGSE14283 38344963 38344996 33 0
Oct1 HelaGSE14283 38344962 38345000 38 0
Oct1 HelaGSE14283 38347530 38347589 59 0
Oct1 HelaGSE14283 38369408 38369437 29 0
P300 T30-glioblastomaGSE21026 38376433 38376975 542 0
Validated miRNA targets Top
Cis-Nats regulation Top
Cluster ID Plue Type Plus Gene Name Plus Chromosome Plus Start Plus End Overlap Length Minus Type Minus Gene Name Minus Chromosome Minus Star Minus End Type
5873 mRNA FLJ40126 chr12 38306286 38588369 70 mRNA SLC2A13 chr12 38438830 38785928Sense/Antisense (SA) pairs

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018