AutismKB 2.0

Annotation Detail for SLC46A3


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Basic Information Top
Gene Symbol:SLC46A3 ( FKSG16,FLJ42613 )
Gene Full Name: solute carrier family 46, member 3
Band: 13q12.3
Quick LinksEntrez ID:283537; OMIM: NA; Uniprot ID:S46A3_HUMAN; ENSEMBL ID: ENSG00000139508; HGNC ID: 27501
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
38N-linked (GlcNAc...) (Potential).
46N-linked (GlcNAc...) (Potential).
53N-linked (GlcNAc...) (Potential).
Location(AA) Modifications Resource
No data
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_181785
  • Location:chr13 28172219-28190961
  • strand:-
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 28190944 28191529 585 275
CTCF G2GSE9613 28195933 28196325 392 5168
Fos K562GSE19551 28190801 28191423 622 151
PAX3-FKHR Rh4GSE19063 28202634 28204323 1689 12517
hScc1 CdLSGSE12603 28190747 28191529 782 177
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
P300 T30-glioblastomaGSE21026 28165853 28166375 522 6106
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 28189251 28189596 345 0
ER Fulvestrant-MCF7GSE14664 28187078 28187113 35 0
H3K4me3 colorectalcancer 28189818 28190773 955 0
LIN9 SGSE7516 28190622 28190944 322 0
Oct1 HelaGSE14283 28187083 28187110 27 0
PHF8 Hs68plusFBSGSE20725 28189952 28191941 1989 0
Validated miRNA targets Top
Cis-Nats regulation Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018