AutismKB 2.0

Annotation Detail for PGP


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Basic Information Top
Gene Symbol:PGP ( MGC4692 )
Gene Full Name: phosphoglycolate phosphatase
Band: 16p13.3
Quick LinksEntrez ID:283871; OMIM: 172280; Uniprot ID:PGP_HUMAN; ENSEMBL ID: ENSG00000184207; HGNC ID: 8909
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_001042371
  • Location:chr16 2201603-2204822
  • strand:-
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
Fos K562GSE19551 2204584 2205722 1138 331
P300 T30-glioblastomaGSE21026 2204084 2205809 1725 124
PHF8 HeLaGSE20725 2203956 2205791 1835 51
PHF8 Hs68minusFBSGSE20725 2205140 2205635 495 565
PHF8 Hs68plusFBSGSE20725 2205146 2205714 568 608
VDR GM10855-UnstimGSE22484 2204323 2205959 1636 319
VDR GM10861-UnstimGSE22484 2204332 2205732 1400 210
VDR GM10861-stimGSE22484 2204404 2205803 1399 281
hScc1 BcellGSE12603 2204471 2205506 1035 166
p130 shRbSenescentGSE19898 2204847 2205355 508 279
No data
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 2203726 2205471 1745 0
H3K4me3 colorectalcancer 2203443 2203726 283 0
Validated miRNA targets Top
Cis-Nats regulation Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018