Annotation Detail for C3orf38
Basic Information Top
| Gene Symbol: | C3orf38 ( FLJ54270,MGC26717 ) |
|---|---|
| Gene Full Name: | chromosome 3 open reading frame 38 |
| Band: | 3p11.1 |
| Quick Links | Entrez ID:285237; OMIM: NA; Uniprot ID:CC038_HUMAN; ENSEMBL ID: ENSG00000179021; HGNC ID: 28384 |
| Relate to Another Database: | SFARIGene; denovo-db |
| No data |
| No data |
| Location(AA) | Modification | Resource |
|---|---|---|
| 7 | Phosphoserine(IKK) | HMM predict |
| 54 | Phosphoserine(ATM) | HMM predict |
| 155 | Phosphoserine(ATM) | HMM predict |
| 183 | N-linked | HMM predict |
| 188 | N-linked | HMM predict |
| 227 | Phosphoserine(CDC2) | HMM predict |
- RefSeq ID: NM_173824
- Location:chr3 88281798-88288754
- strand:+
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| E2F4 | G0 | GSE7516 | 88280978 | 88281964 | 986 | 328 |
| ETS1 | Jurkat | GSE17954 | 88280757 | 88282278 | 1521 | 281 |
| FOXA1 | MCF7 | GSE15244 | 88280796 | 88281010 | 214 | 896 |
| H3K4me3 | colorectal | cancer | 88280796 | 88281010 | 214 | 896 |
| LIN9 | G0 | GSE7516 | 88280796 | 88282117 | 1321 | 342 |
| LIN9 | S | GSE7516 | 88280796 | 88281964 | 1168 | 419 |
| PHF8 | 293T | GSE20725 | 88280794 | 88282288 | 1494 | 258 |
| PHF8 | Hs68plusFBS | GSE20725 | 88280820 | 88282558 | 1738 | 110 |
| Rb | Growing | GSE19898 | 88281119 | 88281319 | 200 | 580 |
| Rb | Quiescent | GSE19898 | 88281473 | 88281712 | 239 | 206 |
| TAF | k562 | GSE8489 | 88280796 | 88282185 | 1389 | 308 |
| p130 | Quiescent | GSE19898 | 88280986 | 88282228 | 1242 | 192 |
| p130 | Senescent | GSE19898 | 88281036 | 88282169 | 1133 | 196 |
| p130 | shRbQuiescent | GSE19898 | 88281036 | 88281462 | 426 | 550 |
| p130 | shRbSenescent | GSE19898 | 88280911 | 88282010 | 1099 | 338 |
| p130 | G0 | GSE7516 | 88280796 | 88282082 | 1286 | 360 |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| Oct1 | Hela | GSE14283 | 88304206 | 88304234 | 28 | 15466 |
| Oct1 | Hela | GSE14283 | 88305624 | 88305653 | 29 | 16884 |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| H3K4me3 | colorectal | cancer | 88282552 | 88283029 | 477 | 0 |
| H3ac | HepG2 | E | 88280796 | 88283029 | 2233 | 0 |
| p130 | shRbQuiescent | GSE19898 | 88281489 | 88282204 | 715 | 0 |
Validated miRNA targets