AutismKB 2.0

Annotation Detail for SCARA5


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Basic Information Top
Gene Symbol:SCARA5 ( FLJ23907,MGC45780,NET33,Tesr )
Gene Full Name: scavenger receptor class A, member 5 (putative)
Band: 8p21.1
Quick LinksEntrez ID:286133; OMIM: 611306; Uniprot ID:SCAR5_HUMAN; ENSEMBL ID: ENSG00000168079; HGNC ID: 28701
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
102N-linked (GlcNAc...) (Potential).
134N-linked (GlcNAc...) (Potential).
193N-linked (GlcNAc...) (Potential).
231N-linked (GlcNAc...) (Potential).
254N-linked (GlcNAc...) (Potential).
300N-linked (GlcNAc...) (Potential).
397N-linked (GlcNAc...) (Potential).
Location(AA) Modifications Resource
102N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
134N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
193N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
231N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
254N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
300N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
397N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
Location(AA) Modification Resource
46Phosphoserine(PKA)HMM predict
86Phosphoserine(IKK)HMM predict
87Phosphoserine(CDK)HMM predict
102N-linkedHMM predict
134N-linkedHMM predict
193N-linkedHMM predict
231N-linkedHMM predict
305O-linkedHMM predict
311O-linkedHMM predict
340O-linkedHMM predict
347O-linkedHMM predict
365O-linkedHMM predict
371O-linkedHMM predict
374O-linkedHMM predict
377O-linkedHMM predict
380MethylarginineHMM predict
397N-linkedHMM predict
443Phosphotyrosine(EGFR)HMM predict
478GlycineHMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_173833
  • Location:chr8 27783668-27906116
  • strand:-
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 27906064 27906230 166 31
CTCF CD4SISSRdata 27906064 27906230 166 31
CTCF JurkatGSE12889 27906052 27906279 227 49
CTCF G2GSE9613 27921430 27921741 311 15469
FoxA1 MCF7MACSdata 27906948 27907145 197 930
P300 T0-glioblastomaGSE21026 27917976 27918514 538 12129
RARG MCF7GSE15244 27906546 27907023 477 668
TFAP2C MCF7GSE21234 27917173 27917546 373 11243
p130 SenescentGSE19898 27907028 27907295 267 1045
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 27777300 27777508 208 6265
CTCF CD4SISSRdata 27777300 27777508 208 6265
CTCF G2GSE9613 27777306 27777628 322 6202
FoxA1 MCF7MACSdata 27782704 27782929 225 852
Myc K562GSE19551 27769052 27769218 166 14534
hScc1 BcellGSE12603 27777342 27777777 435 6109
hScc1 CdLSGSE12603 27777306 27777738 432 6147
hScc1 G2GSE9613 27777306 27777628 322 6202
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 27789458 27790711 1253 0
CTCF G2GSE9613 27792962 27793366 404 0
CTCF G2GSE9613 27797612 27797922 310 0
CTCF G2GSE9613 27807263 27807477 214 0
CTCF G2GSE9613 27814512 27814983 471 0
CTCF G2GSE9613 27817356 27817749 393 0
CTCF G2GSE9613 27823800 27824134 334 0
CTCF G2GSE9613 27828234 27828570 336 0
CTCF G2GSE9613 27832750 27833385 635 0
CTCF G2GSE9613 27834976 27835670 694 0
CTCF G2GSE9613 27843078 27843382 304 0
CTCF G2GSE9613 27847887 27848164 277 0
CTCF G2GSE9613 27861605 27861996 391 0
CTCF G2GSE9613 27871487 27871706 219 0
CTCF G2GSE9613 27890065 27890358 293 0
CTCF G2GSE9613 27893333 27893696 363 0
CTCF G2GSE9613 27902876 27903301 425 0
CTCF G2GSE9613 27905656 27905990 334 0
FOXA1 DLD1GSE12801 27785892 27786509 617 0
FOXA1 DLD1GSE12801 27805386 27805565 179 0
FOXA1 DLD1GSE12801 27810547 27811394 847 0
FOXA1 DLD1GSE12801 27858829 27859164 335 0
FOXA1 MCF7GSE15244 27785818 27786509 691 0
FoxA1 MCF7MACSdata 27785950 27786391 441 0
H3ac HepG2E 27894315 27894489 174 0
NRSF JurkatGSE13047 27900297 27900773 476 0
NRSF JurkatSISSRdata 27835098 27835258 160 0
NRSF-mono JurkatQuESTdata 27900296 27900868 572 0
NRSF pAbJurkat 27842740 27843382 642 0
NRSF pAbJurkat 27861605 27861962 357 0
NRSF pAbJurkat 27893696 27894023 327 0
NRSF-poly JurkatQuESTdata 27900298 27900719 421 0
Oct1 HelaGSE14283 27829119 27829154 35 0
Oct1 HelaGSE14283 27855592 27855625 33 0
Oct1 HelaGSE14283 27881263 27881299 36 0
P300 T30-glioblastomaGSE21026 27785488 27786833 1345 0
P300 T30-glioblastomaGSE21026 27805133 27805863 730 0
P300 T30-glioblastomaGSE21026 27821340 27822224 884 0
RARA MCF7GSE15244 27785930 27786509 579 0
RARA MCF7GSE15244 27804324 27804506 182 0
RARG MCF7GSE15244 27786051 27786509 458 0
TAF HelaGSE8489 27786306 27786509 203 0
TFAP2C MCF7GSE21234 27785935 27786627 692 0
TFAP2C MCF7GSE21234 27805221 27805752 531 0
TFAP2C MCF7GSE21234 27844600 27845071 471 0
TFAP2C MCF7GSE21234 27861310 27862124 814 0
hScc1 BcellGSE12603 27835005 27835600 595 0
hScc1 BcellGSE12603 27879588 27879876 288 0
hScc1 BcellGSE12603 27905858 27906237 379 0
hScc1 CdLSGSE12603 27905918 27906237 319 0
hScc1 G2GSE9613 27814512 27815095 583 0
hScc1 G2GSE9613 27830615 27830839 224 0
hScc1 G2GSE9613 27861605 27862032 427 0
p63 keratinocytesGSE17611 27804166 27804693 527 0
Validated miRNA targets Top
Cis-Nats regulation Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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