AutismKB 2.0

Annotation Detail for C9orf142


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Basic Information Top
Gene Symbol:C9orf142 ( - )
Gene Full Name: chromosome 9 open reading frame 142
Band: 9q34.3
Quick LinksEntrez ID:286257; OMIM: NA; Uniprot ID:CI142_HUMAN; ENSEMBL ID: ENSG00000148362; HGNC ID:
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
148Phosphoserine.
152Phosphoserine.
192Phosphoserine.
Location(AA) Modifications Resource
148Phosphoserine.Swiss-Prot 53.0
148PhosphoserinePhospho.ELM 6.0
152Phosphoserine.Swiss-Prot 53.0
152PhosphoserinePhospho.ELM 6.0
Location(AA) Modification Resource
5Phosphoserine(IKK)HMM predict
29Phosphoserine(CK2)HMM predict
29PhosphoserineHMM predict
95Phosphoserine(CK1)HMM predict
95Phosphoserine(IKK)HMM predict
99Phosphoserine(ATM)HMM predict
134Phosphoserine(PKA)HMM predict
148Phosphoserine(CDC2)HMM predict
148PhosphoserineHMM predict
148Phosphoserine(CDK)HMM predict
152Phosphoserine(CDK)HMM predict
152PhosphoserineHMM predict
152Phosphoserine(CDC2)HMM predict
152O-linkedHMM predict
169MethylarginineHMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_183241
  • Location:chr9 139006690-139008247
  • strand:+
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
ER MCF7GSE19013 139006216 139006681 465 242
Rb SenescentGSE19898 139006478 139006856 378 24
hScc1 BcellGSE12603 139006179 139006435 256 384
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
TFAP2C MCF7GSE21234 139008154 139008962 808 311
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
NFkBII GM12892GSE19485 139006105 139007628 1523 0
PHF8 HeLaGSE20725 139006026 139007753 1727 0
Validated miRNA targets Top
Cis-Nats regulation Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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