Annotation Detail for GSN
Basic Information Top
| Gene Symbol: | GSN ( DKFZp313L0718 ) |
|---|---|
| Gene Full Name: | gelsolin |
| Band: | 9q33.2 |
| Quick Links | Entrez ID:2934; OMIM: 137350; Uniprot ID:GELS_HUMAN; ENSEMBL ID: ENSG00000148180; HGNC ID: 4620 |
| Relate to Another Database: | SFARIGene; denovo-db |
| Location(AA) | Modification | |
|---|---|---|
| 86 | Phosphotyrosine; by SRC; in vitro. | |
| 409 | Phosphotyrosine; by SRC; in vitro. | |
| 465 | Phosphotyrosine; by SRC. | |
| 603 | Phosphotyrosine; by SRC; in vitro. | |
| 651 | Phosphotyrosine; by SRC; in vitro. | |
| Location(AA) | Modifications | Resource |
|---|---|---|
| 86 | Phosphotyrosine; by SRC; in vitro. | Swiss-Prot 53.0 |
| 409 | Phosphotyrosine; by SRC; in vitro. | Swiss-Prot 53.0 |
| 465 | Phosphotyrosine (by SRC). | Swiss-Prot 53.0 |
| 465 | Phosphotyrosine (Src) | Phospho.ELM 6.0 |
| 603 | Phosphotyrosine; by SRC; in vitro. | Swiss-Prot 53.0 |
| 651 | Phosphotyrosine; by SRC; in vitro. | Swiss-Prot 53.0 |
| Location(AA) | Modification | Resource |
|---|---|---|
| 31 | O-linked | HMM predict |
| 32 | Methylarginine | HMM predict |
| 121 | Phosphoserine(ATM) | HMM predict |
| 430 | O-linked | HMM predict |
| 465 | Phosphotyrosine(EGFR) | HMM predict |
| 499 | Phosphothreonine(PKC) | HMM predict |
| 499 | Phosphothreonine(CK2) | HMM predict |
| 651 | Phosphotyrosine(EGFR) | HMM predict |
| 653 | Phosphothreonine(PKC) | HMM predict |
| 654 | Phosphoserine(MAPK) | HMM predict |
| 715 | Phosphoserine(CK2) | HMM predict |
| 742 | Phosphothreonine(PKA) | HMM predict |
- RefSeq ID: NM_000177
- Location:chr9 123101899-123134940
- strand:+
| No data |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| STAT1 | HeLa | GSE12783 | 123135858 | 123139491 | 3633 | 2734 |
| TFAP2C | MCF7 | GSE21234 | 123136282 | 123137919 | 1637 | 2160 |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | CD4 | GSE12889 | 123122155 | 123122480 | 325 | 0 |
| CTCF | CD4 | SISSRdata | 123122155 | 123122480 | 325 | 0 |
| ER | E2-MCF7 | GSE14664 | 123108531 | 123108638 | 107 | 0 |
| ER | Fulvestrant-MCF7 | GSE14664 | 123125685 | 123125729 | 44 | 0 |
| Fos | K562 | GSE19551 | 123122029 | 123122547 | 518 | 0 |
| H3ac | HepG2 | E | 123102243 | 123102839 | 596 | 0 |
| Myc | K562 | GSE19551 | 123122085 | 123122541 | 456 | 0 |
| Oct1 | H2O2-Hela | GSE14283 | 123125685 | 123125716 | 31 | 0 |
| Oct1 | Hela | GSE14283 | 123125684 | 123125718 | 34 | 0 |
| Oct4 | hES | GSE17917 | 123122295 | 123122543 | 248 | 0 |
| P300 | T0-glioblastoma | GSE21026 | 123124308 | 123125226 | 918 | 0 |
| P300 | T30-glioblastoma | GSE21026 | 123124043 | 123125172 | 1129 | 0 |
| Rb | shRbSenescence | GSE19898 | 123122149 | 123122377 | 228 | 0 |
| STAT1 | HeLa | GSE12783 | 123124029 | 123125626 | 1597 | 0 |
| TAFII | hES | GSE17917 | 123122238 | 123122575 | 337 | 0 |
| TFAP2C | MCF7 | GSE21234 | 123128181 | 123128698 | 517 | 0 |
| hScc1 | Bcell | GSE12603 | 123110936 | 123111128 | 192 | 0 |
| hScc1 | Bcell | GSE12603 | 123122099 | 123122420 | 321 | 0 |
| hScc1 | CdLS | GSE12603 | 123121828 | 123122420 | 592 | 0 |
| hScc1 | G2 | GSE9613 | 123121142 | 123122420 | 1278 | 0 |
| p130 | Quiescent | GSE19898 | 123122302 | 123122444 | 142 | 0 |
| p63 | keratinocytes | GSE17611 | 123124198 | 123125172 | 974 | 0 |
| Micro RNA Name | Stem Loop Name | The chromosome that miRNA located | Publication |
|---|---|---|---|
| hsa-miR-1 | hsa-mir-1-2 | 18 | 15685193 |
| hsa-miR-1 | hsa-mir-1-1 | 20 | 15685193 |
| hsa-miR-124 | hsa-mir-124-1 | 8 | 15685193 |
| hsa-miR-124 | hsa-mir-124-2 | 8 | 15685193 |
| hsa-miR-124 | hsa-mir-124-3 | 20 | 15685193 |
| hsa-miR-373 | hsa-mir-373 | 19 | 15685193 |
| hsa-miR-373* | hsa-mir-373 | 19 | 15685193 |
| ID in Tarbase | Data Type | Support Type | miRNA | Gene | Direct Support | Publication |
|---|---|---|---|---|---|---|
| 388 | Unknown | MicroArray | miR-124 | GSN | n_a | 15685193 |
| Ensembl | Protein Type | Differentially expressed in | Pathology or Event | Mis Regulation | Gene Expression | Tumour Involvement |
| ENSG00000148180 | G1-to-S transition | n_a | n_a | "epithelium, lymphoblast, lymphocyte, muscle cell" | "benign tumour, malignant tumour, carcinoma, leukaemia" |
| Cluster ID | Plue Type | Plus Gene Name | Plus Chromosome | Plus Start | Plus End | Overlap Length | Minus Type | Minus Gene Name | Minus Chromosome | Minus Star | Minus End | Type |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 26986 | mRNA | GSN | chr9 | 121109960 | 121174674 | 93 | mRNA | MOST2 | chr9 | 121122599 | 121127362 | Sense/Antisense (SA) pairs |