AutismKB 2.0

Annotation Detail for GNL2


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Basic Information Top
Gene Symbol:GNL2 ( FLJ40906,HUMAUANTIG,NGP1,Ngp-1 )
Gene Full Name: guanine nucleotide binding protein-like 2 (nucleolar)
Band: 1p34.3
Quick LinksEntrez ID:29889; OMIM: 609365; Uniprot ID:NOG2_HUMAN; ENSEMBL ID: ENSG00000134697; HGNC ID: 29925
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
553Phosphoserine.
561Phosphoserine.
563Phosphoserine.
Location(AA) Modifications Resource
553Phosphoserine.Swiss-Prot 53.0
561Phosphoserine.Swiss-Prot 53.0
563Phosphoserine.Swiss-Prot 53.0
Location(AA) Modification Resource
13N-linkedHMM predict
37Phosphothreonine(PKC)HMM predict
44Phosphotyrosine(EGFR)HMM predict
52Phosphoserine(PKG)HMM predict
70Phosphothreonine(PKC)HMM predict
107Phosphotyrosine(Syk)HMM predict
114Phosphoserine(PKG)HMM predict
174SulfotyrosineHMM predict
232O-linkedHMM predict
265Phosphothreonine(PKC)HMM predict
329Phosphothreonine(PKC)HMM predict
372Phosphoserine(CK1)HMM predict
389PhosphoserineHMM predict
405Phosphotyrosine(EGFR)HMM predict
478Phosphoserine(CK1)HMM predict
563Phosphoserine(CK1)HMM predict
563Phosphoserine(ATM)HMM predict
563Phosphoserine(CK2)HMM predict
580Phosphoserine(CK1)HMM predict
581Phosphoserine(CK1)HMM predict
582Phosphoserine(ATM)HMM predict
582Phosphoserine(CK1)HMM predict
591N-linkedHMM predict
642Phosphothreonine(CK2)HMM predict
670Phosphoserine(IKK)HMM predict
678Phosphothreonine(PKC)HMM predict
725LysineHMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_013285
  • Location:chr1 37805004-37834082
  • strand:-
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 37841297 37841638 341 7385
CTCF CD4SISSRdata 37841297 37841638 341 7385
CTCF G2GSE9613 37841306 37841698 392 7420
GABP k562GSE8489 37833044 37835314 2270 97
TAFII hESGSE17917 37833868 37834365 497 34
TFAP2C MCF7GSE21234 37839528 37839980 452 5672
USF1 HepG2E 37833358 37835128 1770 161
hScc1 CdLSGSE12603 37841306 37841625 319 7383
No data
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
GABP k562GSE8489 37831302 37832518 1216 0
H3K4me3 colorectalcancer 37833260 37833763 503 0
H3ac HepG2E 37833108 37833980 872 0
Myc K562GSE19551 37833618 37834538 920 0
Oct1 HelaGSE14283 37823360 37823387 27 0
Oct1 HelaGSE14283 37831777 37831818 41 0
PHF8 293TGSE20725 37833497 37834612 1115 0
PHF8 HeLaGSE20725 37833597 37834493 896 0
PHF8 Hs68minusFBSGSE20725 37833611 37834529 918 0
Rb GrowingGSE19898 37813136 37813367 231 0
Rb GrowingGSE19898 37813369 37813600 231 0
TAF k562GSE8489 37825963 37826522 559 0
TAF k562GSE8489 37833044 37833944 900 0
USF2 HepG2E 37833394 37834726 1332 0
hScc1 BcellGSE12603 37833617 37834335 718 0
p130 SenescentGSE19898 37813041 37813372 331 0
Validated miRNA targets Top
Cis-Nats regulation Top
Cluster ID Plue Type Plus Gene Name Plus Chromosome Plus Start Plus End Overlap Length Minus Type Minus Gene Name Minus Chromosome Minus Star Minus End Type
597 mRNA DNALI1 chr1 37691612 37701550 40 mRNA GNL2 chr1 37701510 37730589Sense/Antisense (SA) pairs

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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