Annotation Detail for CPSF1
Basic Information Top
| Gene Symbol: | CPSF1 ( CPSF160,HSU37012,P/cl.18 ) |
|---|---|
| Gene Full Name: | cleavage and polyadenylation specific factor 1, 160kDa |
| Band: | 8q24.3 |
| Quick Links | Entrez ID:29894; OMIM: 606027; Uniprot ID:CPSF1_HUMAN; ENSEMBL ID: ENSG00000071894; HGNC ID: 2324 |
| Relate to Another Database: | SFARIGene; denovo-db |
| Location(AA) | Modification | |
|---|---|---|
| 739 | Phosphothreonine. | |
| 908 | Nuclear localization signal (Potential). | |
| Location(AA) | Modifications | Resource |
|---|---|---|
| 739 | Phosphothreonine. | Swiss-Prot 53.0 |
| 739 | Phosphothreonine | Phospho.ELM 6.0 |
| 766 | Phosphoserine | Phospho.ELM 6.0 |
| Location(AA) | Modification | Resource |
|---|---|---|
| 24 | N-linked | HMM predict |
| 25 | N-linked | HMM predict |
| 29 | N-linked | HMM predict |
| 104 | Phosphoserine(PKG) | HMM predict |
| 168 | Phosphoserine(PKG) | HMM predict |
| 224 | N-linked | HMM predict |
| 246 | N-linked | HMM predict |
| 290 | N-linked | HMM predict |
| 308 | O-linked | HMM predict |
| 562 | Phosphothreonine | HMM predict |
| 756 | Phosphoserine(CDC2) | HMM predict |
| 765 | Phosphoserine(CDK) | HMM predict |
| 765 | Phosphoserine(PKG) | HMM predict |
| 766 | Phosphoserine(PKG) | HMM predict |
| 766 | Phosphoserine(ATM) | HMM predict |
| 766 | Phosphoserine(PKA) | HMM predict |
| 791 | N-linked | HMM predict |
| 946 | S-palmitoyl | HMM predict |
| 999 | Phosphoserine(PKG) | HMM predict |
| 1034 | Phosphotyrosine(Syk) | HMM predict |
| 1034 | Phosphotyrosine(SRC) | HMM predict |
| 1040 | O-linked | HMM predict |
| 1042 | Phosphothreonine(MAPK) | HMM predict |
| 1042 | O-linked | HMM predict |
| 1066 | Phosphotyrosine(INSR) | HMM predict |
| 1066 | Sulfotyrosine | HMM predict |
| 1110 | Phosphoserine(CK1) | HMM predict |
| 1184 | Phosphoserine(CAMK2) | HMM predict |
| 1356 | Phosphotyrosine(EGFR) | HMM predict |
- RefSeq ID: NM_013291
- Location:chr8 145589254-145605540
- strand:-
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | CD4 | GSE12889 | 145605492 | 145605722 | 230 | 67 |
| CTCF | CD4 | SISSRdata | 145605492 | 145605722 | 230 | 67 |
| Myc | K562 | GSE19551 | 145605253 | 145606000 | 747 | 86 |
| PHF8 | HeLa | GSE20725 | 145605003 | 145606258 | 1255 | 90 |
| Rb | shRbQuiescent | GSE19898 | 145605449 | 145605656 | 207 | 12 |
| hScc1 | Bcell | GSE12603 | 145605225 | 145606140 | 915 | 142 |
| hScc1 | CdLS | GSE12603 | 145605225 | 145605912 | 687 | 28 |
| No data |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| ETS1 | Jurkat | GSE17954 | 145604608 | 145606419 | 1811 | 0 |
| Gata1 | K562 | GSE18868 | 145597999 | 145598609 | 610 | 0 |
| Gata2 | K562 | GSE18868 | 145597854 | 145598562 | 708 | 0 |
| H3K4me3 | colorectal | cancer | 145604472 | 145604836 | 364 | 0 |
| H3ac | HepG2 | E | 145604231 | 145604953 | 722 | 0 |
| NRSF | pAb | Jurkat | 145589622 | 145591028 | 1406 | 0 |
| NRSF | pAb | Jurkat | 145593220 | 145594403 | 1183 | 0 |
| NRSF | pAb | Jurkat | 145596296 | 145597445 | 1149 | 0 |
| NRSF | pAb | Jurkat | 145597686 | 145598121 | 435 | 0 |
| Rb | Quiescent | GSE19898 | 145605453 | 145605592 | 139 | 0 |
| Rb | Senescent | GSE19898 | 145604963 | 145605983 | 1020 | 0 |
| VDR | GM10855-stim | GSE22484 | 145604802 | 145606241 | 1439 | 0 |
| VDR | GM10861-Unstim | GSE22484 | 145604452 | 145606213 | 1761 | 0 |
| VDR | GM10861-stim | GSE22484 | 145604841 | 145606193 | 1352 | 0 |
| p130 | Quiescent | GSE19898 | 145605166 | 145605416 | 250 | 0 |
| p130 | Senescent | GSE19898 | 145605207 | 145605751 | 544 | 0 |
| p130 | shRbSenescent | GSE19898 | 145605249 | 145605523 | 274 | 0 |
Validated miRNA targets