AutismKB 2.0

Annotation Detail for C18orf8


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Basic Information Top
Gene Symbol:C18orf8 ( FLJ23453,HsT2591,MIC1 )
Gene Full Name: chromosome 18 open reading frame 8
Band: 18q11.2
Quick LinksEntrez ID:29919; OMIM: NA; Uniprot ID:MIC1_HUMAN; ENSEMBL ID: ENSG00000141452; HGNC ID: 24326
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
233Phosphothreonine.
234Phosphoserine.
Location(AA) Modifications Resource
233Phosphothreonine.Swiss-Prot 53.0
233PhosphothreoninePhospho.ELM 6.0
234Phosphoserine.Swiss-Prot 53.0
234PhosphoserinePhospho.ELM 6.0
Location(AA) Modification Resource
7Phosphotyrosine(Syk)HMM predict
7Phosphotyrosine(EGFR)HMM predict
98Phosphoserine(CK2)HMM predict
186Phosphothreonine(PKC)HMM predict
204Phosphothreonine(PKC)HMM predict
234Phosphoserine(CK1)HMM predict
235N-linkedHMM predict
261N-linkedHMM predict
327O-linkedHMM predict
327O-linkedHMM predict
329Phosphoserine(CDK)HMM predict
401Phosphoserine(ATM)HMM predict
420Phosphotyrosine(Syk)HMM predict
423Phosphotyrosine(Syk)HMM predict
442Phosphoserine(CDK)HMM predict
442Phosphoserine(MAPK)HMM predict
442Phosphoserine(CDC2)HMM predict
551Phosphoserine(CAMK2)HMM predict
571Phosphoserine(CK1)HMM predict
626Phosphoserine(CDC2)HMM predict
628N-linkedHMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_013326
  • Location:chr18 19337459-19365739
  • strand:+
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 19332862 19333111 249 4473
CTCF CD4SISSRdata 19332862 19333111 249 4473
CTCF G2GSE9613 19337046 19337697 651 88
PHF8 293TGSE20725 19336702 19338132 1430 43
PHF8 HeLaGSE20725 19336699 19338025 1326 98
Sox2 hESGSE18292 19328908 19329150 242 8431
USF1 HepG2E 19334679 19335360 681 2440
hScc1 BcellGSE12603 19333179 19333542 363 4099
p63 keratinocytesGSE17611 19328933 19329617 684 8185
No data
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 19349849 19350270 421 0
CTCF CD4SISSRdata 19349849 19350270 421 0
CTCF G2GSE9613 19339479 19339777 298 0
CTCF G2GSE9613 19349772 19350328 556 0
H3ac HepG2E 19337992 19339005 1013 0
Myc K562GSE19551 19349883 19350271 388 0
Myc K562GSE19551 19362343 19362910 567 0
Oct4 hESGSE17917 19349834 19350182 348 0
P300 T30-glioblastomaGSE21026 19349774 19350600 826 0
Rb SenescentGSE19898 19349980 19350373 393 0
STAT1 HeLaGSE12783 19362284 19364303 2019 0
STAT1 IFNSISSRdata 19362380 19363149 769 0
USF1 HepG2E 19338045 19339005 960 0
hScc1 BcellGSE12603 19337046 19338189 1143 0
hScc1 BcellGSE12603 19339445 19339777 332 0
hScc1 BcellGSE12603 19349772 19350298 526 0
hScc1 CdLSGSE12603 19339369 19339777 408 0
hScc1 CdLSGSE12603 19349808 19350298 490 0
hScc1 G2GSE9613 19339399 19339777 378 0
Validated miRNA targets Top
Cis-Nats regulation Top
Cluster ID Plue Type Plus Gene Name Plus Chromosome Plus Start Plus End Overlap Length Minus Type Minus Gene Name Minus Chromosome Minus Star Minus End Type
12003 mRNA C18orf8 chr18 19337470 19365740 154 mRNA NPC1 chr18 19365461 19420426Sense/Antisense (SA) pairs

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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