Annotation Detail for GYPE
Basic Information Top
| Gene Symbol: | GYPE ( GPE,MNS,MiIX ) |
|---|---|
| Gene Full Name: | glycophorin E (MNS blood group) |
| Band: | 4q31.21 |
| Quick Links | Entrez ID:2996; OMIM: 138590; Uniprot ID:GLPE_HUMAN; ENSEMBL ID: ENSG00000197465; HGNC ID: 4705 |
| Relate to Another Database: | SFARIGene; denovo-db |
| No data |
| No data |
| Location(AA) | Modification | Resource |
|---|---|---|
| 18 | O-linked | HMM predict |
| 20 | O-linked | HMM predict |
| 30 | O-linked | HMM predict |
| 30 | O-linked | HMM predict |
| 30 | O-linked | HMM predict |
| 32 | O-linked | HMM predict |
| 33 | O-linked | HMM predict |
| 42 | Phosphoserine(ATM) | HMM predict |
- RefSeq ID: NM_002102
- Location:chr4 145015915-145046165
- strand:-
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | G2 | GSE9613 | 145048299 | 145048704 | 405 | 2336 |
| CTCF | G2 | GSE9613 | 145052605 | 145052995 | 390 | 6635 |
| Gata1 | K562 | GSE18868 | 145046008 | 145046552 | 544 | 115 |
| Gata2 | K562 | GSE18868 | 145045965 | 145046457 | 492 | 46 |
| H3K4me3 | colorectal | cancer | 145052390 | 145052692 | 302 | 6376 |
| hScc1 | Bcell | GSE12603 | 145048371 | 145048741 | 370 | 2391 |
| hScc1 | Bcell | GSE12603 | 145052605 | 145052995 | 390 | 6635 |
| hScc1 | CdLS | GSE12603 | 145048266 | 145048811 | 545 | 2373 |
| hScc1 | G2 | GSE9613 | 145048299 | 145048704 | 405 | 2336 |
| No data |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| hScc1 | Bcell | GSE12603 | 145020327 | 145020464 | 137 | 0 |
Validated miRNA targets| Cluster ID | Plue Type | Plus Gene Name | Plus Chromosome | Plus Start | Plus End | Overlap Length | Minus Type | Minus Gene Name | Minus Chromosome | Minus Star | Minus End | Type |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 20280 | EST | chr4 | 145111317 | 145164612 | 14988 | mRNA | GYPE | chr4 | 145149624 | 145184321 | Non-exonic Bidirectional (NOB) pairs | |