AutismKB 2.0

Annotation Detail for STRN3


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Basic Information Top
Gene Symbol:STRN3 ( SG2NA )
Gene Full Name: striatin, calmodulin binding protein 3
Band: 14q12
Quick LinksEntrez ID:29966; OMIM: NA; Uniprot ID:STRN3_HUMAN; ENSEMBL ID: ENSG00000196792; HGNC ID: 15720
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
229Phosphoserine.
257Phosphoserine.
Location(AA) Modifications Resource
229Phosphoserine.Swiss-Prot 53.0
229PhosphoserinePhospho.ELM 6.0
Location(AA) Modification Resource
31Phosphoserine(CDC2)HMM predict
46O-linkedHMM predict
257PhosphoserineHMM predict
257Phosphoserine(CK2)HMM predict
355Phosphotyrosine(Jak)HMM predict
369N-linkedHMM predict
394N-linkedHMM predict
455SulfotyrosineHMM predict
457SulfotyrosineHMM predict
710N-linkedHMM predict
773Phosphotyrosine(Syk)HMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_014574
  • Location:chr14 30432761-30565339
  • strand:-
No data
No data
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 30445734 30445959 225 0
CTCF CD4GSE12889 30519189 30519370 181 0
CTCF CD4SISSRdata 30445734 30445959 225 0
CTCF CD4SISSRdata 30519189 30519370 181 0
ER E2-MCF7GSE14664 30471985 30472020 35 0
ER Fulvestrant-MCF7GSE14664 30471985 30472022 37 0
ER Fulvestrant-MCF7GSE14664 30562689 30562776 87 0
H3K4me3 colorectalcancer 30563435 30564430 995 0
H3ac HepG2E 30562225 30564919 2694 0
Nanog hESGSE18292 30519224 30519363 139 0
Oct1 HelaGSE14283 30471241 30471273 32 0
Oct1 HelaGSE14283 30471985 30472022 37 0
Oct1 HelaGSE14283 30521398 30521428 30 0
TAF HelaGSE8489 30563435 30564287 852 0
TAF k562GSE8489 30563058 30564526 1468 0
hScc1 BcellGSE12603 30445702 30446079 377 0
hScc1 CdLSGSE12603 30445473 30446079 606 0
p130 shRbQuiescentGSE19898 30564152 30565073 921 0
Validated miRNA targets Top
Cis-Nats regulation Top
Cluster ID Plue Type Plus Gene Name Plus Chromosome Plus Start Plus End Overlap Length Minus Type Minus Gene Name Minus Chromosome Minus Star Minus End Type
7758 mRNA COCH chr14 30413528 30434010 141 mRNA STRN3 chr14 30432760 30565340Sense/Antisense (SA) pairs

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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