AutismKB 2.0

Annotation Detail for SCHIP1


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Basic Information Top
Gene Symbol:SCHIP1 ( FLJ39160,SCHIP-1 )
Gene Full Name: schwannomin interacting protein 1
Band: 3q25.33
Quick LinksEntrez ID:29970; OMIM: NA; Uniprot ID:SCHI1_HUMAN; ENSEMBL ID: ENSG00000151967,ENSG00000214216; HGNC ID: 15678
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_014575
  • Location:chr3 160474237-161097832
  • strand:+
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
NRSF mAbJurkat 160470348 160471806 1458 3161
NRSF-mono JurkatQuESTdata 160473759 160474552 793 82
NRSF-poly JurkatQuESTdata 160473660 160474663 1003 76
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 161103562 161103771 209 5834
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CBP T30-glioblastomaGSE21026 160975726 160976882 1156 0
CTCF CD4GSE12889 161005752 161005906 154 0
CTCF CD4GSE12889 161029008 161029181 173 0
CTCF CD4GSE12889 161085361 161085661 300 0
CTCF CD4SISSRdata 161005752 161005906 154 0
CTCF CD4SISSRdata 161029008 161029181 173 0
CTCF CD4SISSRdata 161085361 161085661 300 0
CTCF HelaGSE12889 160522747 160523096 349 0
CTCF G2GSE9613 160522801 160523091 290 0
CTCF G2GSE9613 160687238 160687531 293 0
CTCF G2GSE9613 160767120 160767263 143 0
CTCF G2GSE9613 160786855 160787387 532 0
CTCF G2GSE9613 160816602 160817103 501 0
CTCF G2GSE9613 160847297 160847531 234 0
CTCF G2GSE9613 160940749 160940942 193 0
CTCF G2GSE9613 160962676 160962858 182 0
CTCF G2GSE9613 160963579 160964501 922 0
CTCF G2GSE9613 160965030 160965975 945 0
CTCF G2GSE9613 160966980 160967390 410 0
CTCF G2GSE9613 160982448 160982626 178 0
CTCF G2GSE9613 161005577 161005936 359 0
CTCF G2GSE9613 161025859 161026003 144 0
CTCF G2GSE9613 161029004 161029386 382 0
CTCF G2GSE9613 161053559 161053780 221 0
CTCF G2GSE9613 161085308 161086086 778 0
FOXA1 MCF7GSE15244 160560349 160560675 326 0
FOXA1 MCF7GSE15244 160618404 160618578 174 0
FOXA1 MCF7GSE15244 160828120 160828808 688 0
FOXA1 MCF7GSE15244 160965749 160966342 593 0
FOXA1 MCF7GSE15244 160983232 160984204 972 0
FOXA1 MCF7GSE15244 160985449 160986172 723 0
FOXA1 MCF7GSE15244 160987375 160988911 1536 0
FOXA1 MCF7GSE15244 161014899 161015322 423 0
FOXA1 MCF7GSE15244 161029992 161030350 358 0
FOXA1 MCF7GSE15244 161041380 161041821 441 0
FoxA1 MCF7MACSdata 160828246 160828512 266 0
FoxA1 MCF7MACSdata 160885388 160885522 134 0
FoxA1 MCF7MACSdata 160983587 160983830 243 0
FoxA1 MCF7MACSdata 160985798 160986201 403 0
FoxA1 MCF7MACSdata 160987697 160987853 156 0
FoxA1 MCF7MACSdata 161041590 161041746 156 0
NRSF JurkatGSE13047 160473760 160474891 1131 0
NRSF JurkatSISSRdata 160474123 160474440 317 0
NRSF mAbJurkat 160472433 160478084 5651 0
Nanog hESGSE18292 160760702 160761077 375 0
Oct4 ESGSE20650 160894703 160894795 92 0
P300 T30-glioblastomaGSE21026 161054718 161056012 1294 0
P300 T30-glioblastomaGSE21026 161072567 161073492 925 0
PHF8 HeLaGSE20725 160963393 160965945 2552 0
PHF8 Hs68minusFBSGSE20725 161025832 161026624 792 0
RARA MCF7GSE15244 160828120 160828771 651 0
RARA MCF7GSE15244 160988174 160988979 805 0
RARA MCF7GSE15244 161029843 161030424 581 0
RARG MCF7GSE15244 160988418 160988979 561 0
RARG MCF7GSE15244 160995315 160995732 417 0
RARG MCF7GSE15244 161029882 161030350 468 0
SRF HelaGSE8489 160974304 160977326 3022 0
STAT1 HeLaGSE12783 160871328 160872842 1514 0
STAT1 HeLaGSE12783 161002982 161003911 929 0
Sox2 hESGSE18292 160760580 160761457 877 0
TFAP2C MCF7GSE21234 160605048 160605584 536 0
TFAP2C MCF7GSE21234 160629999 160630469 470 0
TFAP2C MCF7GSE21234 160833157 160833666 509 0
TFAP2C MCF7GSE21234 160864497 160864837 340 0
TFAP2C MCF7GSE21234 160965662 160966557 895 0
TFAP2C MCF7GSE21234 161014662 161015478 816 0
TFAP2C MCF7GSE21234 161030125 161030454 329 0
VDR GM10861-stimGSE22484 160986629 160987874 1245 0
hScc1 BcellGSE12603 160965339 160965900 561 0
hScc1 BcellGSE12603 161005441 161005936 495 0
hScc1 BcellGSE12603 161029004 161029350 346 0
hScc1 BcellGSE12603 161085308 161085707 399 0
hScc1 CdLSGSE12603 160522691 160523444 753 0
hScc1 CdLSGSE12603 161005296 161006266 970 0
hScc1 CdLSGSE12603 161028962 161029386 424 0
hScc1 CdLSGSE12603 161085057 161085875 818 0
hScc1 G2GSE9613 160816602 160817103 501 0
hScc1 G2GSE9613 160962676 160963032 356 0
hScc1 G2GSE9613 160964992 160966437 1445 0
hScc1 G2GSE9613 161005369 161006012 643 0
hScc1 G2GSE9613 161028962 161029386 424 0
hScc1 G2GSE9613 161085057 161085801 744 0
p130 QuiescentGSE19898 160819763 160819936 173 0
p130 shRbQuiescentGSE19898 160963349 160964072 723 0
p130 shRbQuiescentGSE19898 160965611 160966382 771 0
p130 shRbSenescentGSE19898 160810225 160810459 234 0
p63 keratinocytesGSE17611 160680124 160680891 767 0
p63 keratinocytesGSE17611 161029785 161030736 951 0
p63 keratinocytesGSE17611 161081889 161083007 1118 0
Validated miRNA targets Top
Cis-Nats regulation Top
Cluster ID Plue Type Plus Gene Name Plus Chromosome Plus Start Plus End Overlap Length Minus Type Minus Gene Name Minus Chromosome Minus Star Minus End Type
18916 mRNA SCHIP1 chr3 160965186 161097851 3068 EST chr3 160965877 160968945 Non-exonic Bidirectional (NOB) pairs

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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