AutismKB 2.0

Annotation Detail for HIST1H1C


View Evidences View Variants View Annotations
Basic Information Top
Gene Symbol:HIST1H1C ( H1.2,H1C,H1F2,MGC3992 )
Gene Full Name: histone cluster 1, H1c
Band: 6p22.2
Quick LinksEntrez ID:3006; OMIM: 142710; Uniprot ID:H12_HUMAN; ENSEMBL ID: ENSG00000187837; HGNC ID: 4716
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
2N-acetylserine; partial.
2Phosphoserine.
4Phosphothreonine.
31Phosphothreonine.
34N6-methyllysine.
36Phosphoserine.
146Phosphothreonine.
173Phosphoserine.
Location(AA) Modifications Resource
1PhosphoserinePhospho.ELM 6.0
2N-acetylserine.Swiss-Prot 53.0
30PhosphothreoninePhospho.ELM 6.0
31Phosphothreonine.Swiss-Prot 53.0
36Phosphoserine (By similarity).Swiss-Prot 53.0
172PhosphoserinePhospho.ELM 6.0
173Phosphoserine.Swiss-Prot 53.0
Location(AA) Modification Resource
31Phosphothreonine(CDK)HMM predict
31Phosphothreonine(MAPK)HMM predict
36PhosphoserineHMM predict
36Phosphoserine(PKB)HMM predict
36Phosphoserine(PKG)HMM predict
36Phosphoserine(PKC)HMM predict
36O-linkedHMM predict
36Phosphoserine(PKA)HMM predict
76N-linkedHMM predict
77N-linkedHMM predict
113Phosphoserine(CK2)HMM predict
146Phosphothreonine(MAPK)HMM predict
154Phosphothreonine(CDK)HMM predict
154Phosphothreonine(MAPK)HMM predict
154Phosphothreonine(CDC2)HMM predict
165Phosphothreonine(PKC)HMM predict
173PhosphoserineHMM predict
173Phosphoserine(CDC2)HMM predict
188Phosphoserine(PKG)HMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_005319
  • Location:chr6 26163946-26164677
  • strand:-
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 26172655 26172945 290 8123
CTCF G2GSE9613 26174271 26174616 345 9766
Oct1 H2O2-HelaGSE14283 26168049 26168082 33 3388
hScc1 BcellGSE12603 26174121 26174474 353 9620
hScc1 CdLSGSE12603 26172655 26172945 290 8123
hScc1 CdLSGSE12603 26173428 26174543 1115 9308
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
E2F4 G0GSE7516 26163046 26164643 1597 102
Fos K562GSE19551 26162118 26164250 2132 763
H3K4me3 colorectalcancer 26162906 26163982 1076 503
H3ac HepG2E 26162301 26164053 1752 770
LIN9 G0GSE7516 26162978 26164643 1665 136
LIN9 SGSE7516 26163013 26164559 1546 161
P300 T30-glioblastomaGSE21026 26162716 26164293 1577 442
Pol2 GM12878GSE19551 26162068 26164981 2913 422
PolII HeLaGSE12783 26159860 26165498 5638 1268
TAF HelaGSE8489 26162906 26163712 806 638
TAF k562GSE8489 26162301 26163982 1681 805
USF2 HepG2E 26162676 26163828 1152 695
VDR GM10855-UnstimGSE22484 26161417 26166305 4888 86
VDR GM10855-stimGSE22484 26161409 26165527 4118 479
VDR GM10861-stimGSE22484 26161279 26165884 4605 365
p130 QuiescentGSE19898 26163003 26164160 1157 365
p130 SenescentGSE19898 26162902 26164290 1388 351
p130 shRbQuiescentGSE19898 26162825 26164714 1889 177
p130 shRbSenescentGSE19898 26162616 26164181 1565 548
p130 G0GSE7516 26163046 26164604 1558 122
p130 SGSE7516 26163013 26164643 1630 119
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 26163408 26164789 1381 0
PHF8 293TGSE20725 26163544 26164968 1424 0
PHF8 HeLaGSE20725 26163701 26165104 1403 0
VDR GM10861-UnstimGSE22484 26161975 26166392 4417 0
Validated miRNA targets Top
Cis-Nats regulation Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


Copyright © 2017, Center for Bioinformatics , Peking University | All Rights Reserved