Annotation Detail for HIST1H2AE
Basic Information Top
| Gene Symbol: | HIST1H2AE ( H2A.1,H2A.2,H2A/a,H2AFA,HIST1H2AB ) |
|---|---|
| Gene Full Name: | histone cluster 1, H2ae |
| Band: | 6p22.2 |
| Quick Links | Entrez ID:3012; OMIM: 602786; Uniprot ID:H2A1B_HUMAN; ENSEMBL ID: ENSG00000168274; HGNC ID: 4724 |
| Relate to Another Database: | SFARIGene; denovo-db |
| Location(AA) | Modification | |
|---|---|---|
| 2 | N-acetylserine. | |
| 2 | Phosphoserine (By similarity). | |
| 4 | Citrulline; alternate. | |
| 4 | Symmetric dimethylarginine; alternate (By | |
| 6 | N6-acetyllysine (By similarity). | |
| 121 | Phosphothreonine. | |
| 123 | Phosphoserine. | |
| Location(AA) | Modifications | Resource |
|---|---|---|
| 2 | N-acetylserine. | Swiss-Prot 53.0 |
| 2 | Phosphoserine (By similarity). | Swiss-Prot 53.0 |
| 4 | Citrulline; alternate. | Swiss-Prot 53.0 |
| 4 | Symmetric dimethylarginine; alternate (Bysimilarity). | Swiss-Prot 53.0 |
| 6 | N6-acetyllysine (By similarity). | Swiss-Prot 53.0 |
| 120 | Glycyl lysine isopeptide (Lys-Gly)(interchain with G-Cter in ubiquitin). | Swiss-Prot 53.0 |
| 121 | Phosphothreonine (Probable). | Swiss-Prot 53.0 |
| Location(AA) | Modification | Resource |
|---|---|---|
| 17 | Phosphothreonine(PKC) | HMM predict |
| 20 | Phosphoserine(PKA) | HMM predict |
- RefSeq ID: NM_003513
- Location:chr6 26141298-26141774
- strand:-
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| Oct1 | H2O2-Hela | GSE14283 | 26144471 | 26144501 | 30 | 2712 |
| Oct1 | Hela | GSE14283 | 26144471 | 26144501 | 30 | 2712 |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| LIN9 | S | GSE7516 | 26139886 | 26141903 | 2017 | 404 |
| p130 | G0 | GSE7516 | 26139771 | 26141863 | 2092 | 482 |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | G2 | GSE9613 | 26141356 | 26141754 | 398 | 0 |
| H3K4me3 | colorectal | cancer | 26140886 | 26141939 | 1053 | 0 |
| H3ac | HepG2 | E | 26140886 | 26141754 | 868 | 0 |
| Pol2 | GM12878 | GSE19551 | 26140638 | 26142256 | 1618 | 0 |
| hScc1 | Bcell | GSE12603 | 26141536 | 26141790 | 254 | 0 |
| Micro RNA Name | Stem Loop Name | The chromosome that miRNA located | Publication |
|---|---|---|---|
| hsa-let-7f | hsa-let-7f-1 | 9 | 20969724 |
| hsa-let-7f | hsa-let-7f-2 | X | 20969724 |
| hsa-let-7f | hsa-let-7f-1 | 9 | 20969724 |
| hsa-let-7f | hsa-let-7f-2 | X | 20969724 |
| hsa-miR-125b | hsa-mir-125b-1 | 11 | 20969724 |
| hsa-miR-125b | hsa-mir-125b-2 | 21 | 20969724 |
| hsa-miR-125b | hsa-mir-125b-1 | 11 | 20969724 |
| hsa-miR-125b | hsa-mir-125b-2 | 21 | 20969724 |
| hsa-miR-221 | hsa-mir-221 | X | 20969724 |
| hsa-miR-221 | hsa-mir-221 | X | 20969724 |
| hsa-miR-221* | hsa-mir-221 | X | 20969724 |
| hsa-miR-221* | hsa-mir-221 | X | 20969724 |
| hsa-miR-222 | hsa-mir-222 | X | 20969724 |
| hsa-miR-222 | hsa-mir-222 | X | 20969724 |
| hsa-miR-222* | hsa-mir-222 | X | 20969724 |
| hsa-miR-222* | hsa-mir-222 | X | 20969724 |
| hsa-miR-23a | hsa-mir-23a | 19 | 20969724 |
| hsa-miR-23a | hsa-mir-23a | 19 | 20969724 |
| hsa-miR-23a* | hsa-mir-23a | 19 | 20969724 |
| hsa-miR-23a* | hsa-mir-23a | 19 | 20969724 |
| hsa-miR-558 | hsa-mir-558 | 2 | 20969724 |
| hsa-miR-558 | hsa-mir-558 | 2 | 20969724 |
| hsa-miR-766 | hsa-mir-766 | X | 20969724 |
| hsa-miR-766 | hsa-mir-766 | X | 20969724 |
| No data |
Cis-Nats regulation