AutismKB 2.0

Annotation Detail for HDLBP


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Basic Information Top
Gene Symbol:HDLBP ( FLJ16432,HBP,PRO2900,VGL )
Gene Full Name: high density lipoprotein binding protein
Band: 2q37.3
Quick LinksEntrez ID:3069; OMIM: 142695; Uniprot ID:VIGLN_HUMAN; ENSEMBL ID: ENSG00000115677; HGNC ID: 4857
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
2N-acetylserine.
31Phosphoserine.
295Phosphothreonine (Potential).
296Phosphothreonine (Potential).
437Phosphotyrosine.
944Phosphoserine.
1223Phosphoserine.
Location(AA) Modifications Resource
31Phosphoserine.Swiss-Prot 53.0
31PhosphoserinePhospho.ELM 6.0
295Phosphothreonine (Potential).Swiss-Prot 53.0
296Phosphothreonine (Potential).Swiss-Prot 53.0
437Phosphotyrosine.Swiss-Prot 53.0
437PhosphotyrosinePhospho.ELM 6.0
944Phosphoserine.Swiss-Prot 53.0
944PhosphoserinePhospho.ELM 6.0
1223Phosphoserine.Swiss-Prot 53.0
1223PhosphoserinePhospho.ELM 6.0
Location(AA) Modification Resource
11Phosphoserine(CK2)HMM predict
35Phosphoserine(ATM)HMM predict
89Phosphotyrosine(Syk)HMM predict
89Phosphotyrosine(INSR)HMM predict
89Phosphotyrosine(SRC)HMM predict
149Phosphothreonine(PKC)HMM predict
264N-linkedHMM predict
296Phosphothreonine(PKA)HMM predict
305Phosphoserine(PKG)HMM predict
336Phosphoserine(IKK)HMM predict
338Phosphoserine(CK1)HMM predict
367O-linkedHMM predict
437Phosphotyrosine(INSR)HMM predict
526O-linkedHMM predict
583Phosphoserine(CK1)HMM predict
585Phosphoserine(ATM)HMM predict
622Phosphoserine(IKK)HMM predict
624Phosphoserine(CK1)HMM predict
695Phosphoserine(IKK)HMM predict
725Phosphothreonine(PKC)HMM predict
729Phosphothreonine(PKC)HMM predict
842Phosphothreonine(PKC)HMM predict
875Phosphothreonine(PKC)HMM predict
892O-linkedHMM predict
920O-linkedHMM predict
1237Phosphoserine(CDC2)HMM predict
1245Phosphoserine(CK1)HMM predict
1245Phosphoserine(CK2)HMM predict
1265GlycineHMM predict
1266ProlineHMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_005336
  • Location:chr2 241816816-241903907
  • strand:-
No data
No data
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 241877849 241877972 123 0
CTCF CD4SISSRdata 241877849 241877972 123 0
CTCF G2GSE9613 241890863 241891126 263 0
ER MCF7GSE19013 241896624 241897196 572 0
FOXA1 MCF7GSE15244 241873432 241873642 210 0
Fos K562GSE19551 241903097 241903543 446 0
FoxA1 MCF7MACSdata 241873297 241873550 253 0
H3ac HepG2E 241900250 241901342 1092 0
H3ac HepG2E 241901682 241902961 1279 0
Myc K562GSE19551 241867484 241867882 398 0
TAF HelaGSE8489 241901997 241902923 926 0
TAF k562GSE8489 241901682 241902860 1178 0
USF1 HepG2E 241900250 241901342 1092 0
USF1 HepG2E 241901682 241902997 1315 0
p130 shRbQuiescentGSE19898 241902496 241903877 1381 0
p63 keratinocytesGSE17611 241875557 241876471 914 0
Validated miRNA targets Top
Cis-Nats regulation Top
Cluster ID Plue Type Plus Gene Name Plus Chromosome Plus Start Plus End Overlap Length Minus Type Minus Gene Name Minus Chromosome Minus Star Minus End Type
15917 mRNA SEPT2 chr2 241974712 242013429 41 mRNA HDLBP chr2 241888133 241975225Sense/Antisense (SA) pairs

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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