Annotation Detail for CXXC1

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Basic Information Top

Gene Symbol:	CXXC1 ( 2410002I16Rik,5830420C16Rik,CFP1,CGBP,HsT2645,PCCX1,PHF18,SPP1,ZCGPC1,hCGBP )
Gene Full Name:	CXXC finger protein 1
Band:	18q21.1
Quick Links	Entrez ID:30827; OMIM: 609150; Uniprot ID:CXXC1_HUMAN; ENSEMBL ID: ENSG00000154832; HGNC ID: 24343
Relate to Another Database:	SFARIGene; denovo-db

Pathways, Diseases and Drugs

TF binding site

Post Translation Modification

PTM Sites from Uniprot:3 results
Experimental PTM Sites from dbPTM:0 results
Predicted PTM Sites by profile HMM from dbPTM:0 results

Location(AA)	Modification
63	N6-acetyllysine.
224	Phosphoserine.
227	Phosphothreonine.

Validated transcription factor binding site by ChIP-Chip and ChIP-Seq

RefSeq ID: NM_014593
Location:chr18 46062716-46068185
strand:-

Upstream the gene:8 results
Downstream the gene:0 results
Inside the gene:14 results

Transcrip Factors	Experimental Cell	Database	TF Binding Start	TF Binding End	TF Binding Length	The Distance to Gene
ETS1	Jurkat	GSE17954	46067567	46068961	1394	79
P300	T0-glioblastoma	GSE21026	46067892	46068842	950	182
P300	T30-glioblastoma	GSE21026	46067742	46068742	1000	57
Rb	Growing	GSE19898	46067835	46068590	755	27
p130	Quiescent	GSE19898	46068438	46068682	244	375
p130	Senescent	GSE19898	46067774	46068722	948	63
p130	shRbQuiescent	GSE19898	46068070	46068703	633	201
p130	shRbSenescent	GSE19898	46068321	46068615	294	283

Transcrip Factors	Experimental Cell	Database	TF Binding Start	TF Binding End	TF Binding Length	The Distance to Gene
CTCF	G2	GSE9613	46064570	46064859	289	0
CTCF	G2	GSE9613	46067765	46068035	270	0
H3K4me2	HCT116	GSE10453	46067390	46068000	610	0
H3K4me3	colorectal	cancer	46067199	46067902	703	0
H3ac	HepG2	E	46066737	46068116	1379	0
PHF8	293T	GSE20725	46067775	46068434	659	0
PHF8	HeLa	GSE20725	46067389	46068546	1157	0
Rb	Quiescent	GSE19898	46067911	46068449	538	0
Rb	Senescent	GSE19898	46067673	46068513	840	0
hScc1	Bcell	GSE12603	46065964	46066316	352	0
hScc1	Bcell	GSE12603	46067022	46068349	1327	0
hScc1	CdLS	GSE12603	46067199	46068673	1474	0
p130	Quiescent	GSE19898	46067917	46068401	484	0
p130	shRbSenescent	GSE19898	46066844	46067265	421	0

Validated miRNA targets

Cis-Nats regulation

Simple Query:

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

Studies: 1,036
Genes: 1,379
CNVs/SVs: 5,420
SNVs/Indels: 11,669
de novo Mutations: 5,669
Mosaics: 789
Linkage Regions: 172

Paper Collected: 6/30/2018

Last Update: 8/26/2018

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