AutismKB 2.0

Annotation Detail for HLA-DMA


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Basic Information Top
Gene Symbol:HLA-DMA ( D6S222E,DMA,HLADM,RING6 )
Gene Full Name: major histocompatibility complex, class II, DM alpha
Band: 6p21.32
Quick LinksEntrez ID:3108; OMIM: 142855; Uniprot ID:Q31604_HUMAN; ENSEMBL ID: ENSG00000204257; HGNC ID: 4934
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_006120
  • Location:chr6 33024373-33028830
  • strand:-
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 33028897 33029665 768 451
Fos K562GSE19551 33028622 33029202 580 82
P300 T30-glioblastomaGSE21026 33028522 33029391 869 126
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 33023664 33023904 240 590
CTCF CD4SISSRdata 33023664 33023904 240 590
CTCF HelaGSE12889 33023659 33023847 188 621
CTCF G2GSE9613 33023515 33023991 476 621
Myc K562GSE19551 33023640 33023998 358 555
TAFII hESGSE17917 33023647 33023846 199 627
hScc1 BcellGSE12603 33023515 33024128 613 552
hScc1 CdLSGSE12603 33023515 33024284 769 474
hScc1 G2GSE9613 33023515 33024022 507 605
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 33026299 33026588 289 0
Pol2 GM12878GSE19551 33028154 33029227 1073 0
hScc1 CdLSGSE12603 33028545 33029082 537 0
Validated miRNA targets Top
Cis-Nats regulation Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018