Annotation Detail for HLA-G

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Basic Information Top

Gene Symbol:	HLA-G ( MHC-G )
Gene Full Name:	major histocompatibility complex, class I, G
Band:	6p22.1
Quick Links	Entrez ID:3135; OMIM: 142871; Uniprot ID:HLAG_HUMAN; ENSEMBL ID: ENSG00000204632; HGNC ID: 4964
Relate to Another Database:	SFARIGene; denovo-db

Post Translation Modification

Location(AA)	Modification
110	N-linked (GlcNAc...) (By similarity).

Location(AA)	Modifications	Resource
110	N-linked (GlcNAc...) (By similarity).	Swiss-Prot 53.0

Validated transcription factor binding site by ChIP-Chip and ChIP-Seq

Transcrip Factors	Experimental Cell	Database	TF Binding Start	TF Binding End	TF Binding Length	The Distance to Gene
CTCF	G2	GSE9613	29888744	29889149	405	14550
ER	E2-MCF7	GSE14664	29885324	29885356	32	18157
H3K27me3	colorectal	cancer	29902072	29903222	1150	850
Oct1	Hela	GSE14283	29890052	29890079	27	13431
Oct1	Hela	GSE14283	29899011	29899045	34	4469
TFAP2C	MCF7	GSE21234	29888771	29889343	572	14440

Transcrip Factors	Experimental Cell	Database	TF Binding Start	TF Binding End	TF Binding Length	The Distance to Gene
CTCF	CD4	GSE12889	29910645	29910932	287	3933
CTCF	CD4	GSE12889	29923805	29924237	432	17166
CTCF	CD4	SISSRdata	29910645	29910932	287	3933
CTCF	CD4	SISSRdata	29923805	29924237	432	17166
CTCF	Hela	GSE12889	29910714	29910904	190	3954
CTCF	Hela	GSE12889	29923769	29924170	401	17114
CTCF	Jurkat	GSE12889	29923883	29924240	357	17206
CTCF	G2	GSE9613	29909902	29910045	143	3118
CTCF	G2	GSE9613	29910705	29911025	320	4010
CTCF	G2	GSE9613	29923240	29924501	1261	17015
GABP	k562	GSE8489	29920643	29920788	145	13860
Myc	K562	GSE19551	29923748	29924203	455	17120
Nanog	hES	GSE18292	29920287	29920587	300	13582
Oct1	H2O2-Hela	GSE14283	29919846	29919877	31	13006
Oct1	Hela	GSE14283	29913142	29913174	32	6303
Oct1	Hela	GSE14283	29919833	29919888	55	13005
Oct4	hES	GSE17917	29923846	29924338	492	17237
hScc1	Bcell	GSE12603	29910705	29911162	457	4078
hScc1	Bcell	GSE12603	29923240	29924397	1157	16963
hScc1	CdLS	GSE12603	29910705	29911458	753	4226
hScc1	CdLS	GSE12603	29923578	29924433	855	17150
hScc1	G2	GSE9613	29909902	29910272	370	3232
hScc1	G2	GSE9613	29910705	29911126	421	4060
hScc1	G2	GSE9613	29923578	29924711	1133	17289

Transcrip Factors	Experimental Cell	Database	TF Binding Start	TF Binding End	TF Binding Length
CTCF	G2	GSE9613	29903742	29904144	402
Oct1	Hela	GSE14283	29904518	29904573	55
hScc1	Bcell	GSE12603	29903620	29904240	620

Validated miRNA targets

Micro RNA Name	Stem Loop Name	The chromosome that miRNA located	Publication
hsa-miR-1224-5p	hsa-mir-1224	3	19664672
hsa-miR-1262	hsa-mir-1262	1	19664672
hsa-miR-148a	hsa-mir-148a	7	19664672
hsa-miR-148a	hsa-mir-148a	7	17847008
hsa-miR-148a*	hsa-mir-148a	7	19664672
hsa-miR-148a*	hsa-mir-148a	7	17847008
hsa-miR-148b	hsa-mir-148b	12	19664672
hsa-miR-148b	hsa-mir-148b	12	17847008
hsa-miR-148b*	hsa-mir-148b	12	19664672
hsa-miR-148b*	hsa-mir-148b	12	17847008
hsa-miR-152	hsa-mir-152	17	19664672
hsa-miR-152	hsa-mir-152	17	17847008
hsa-miR-19a*	hsa-mir-19a	13	19664672
hsa-miR-218	hsa-mir-218-1	4	19664672
hsa-miR-218	hsa-mir-218-2	5	19664672
hsa-miR-218-2*	hsa-mir-218-2	5	19664672
hsa-miR-331-5p	hsa-mir-331	12	19664672
hsa-miR-433	hsa-mir-433	14	19664672
hsa-miR-508-5p	hsa-mir-508	X	19664672
hsa-miR-513a-5p	hsa-mir-513a-1	X	19664672
hsa-miR-513a-5p	hsa-mir-513a-2	X	19664672
hsa-miR-513b	hsa-mir-513b	X	19664672
hsa-miR-518c*	hsa-mir-518c	19	19664672
hsa-miR-589*	hsa-mir-589	7	19664672
hsa-miR-616	hsa-mir-616	12	19664672
hsa-miR-616*	hsa-mir-616	12	19664672
hsa-miR-661	hsa-mir-661	8	19664672
hsa-miR-92a-1*	hsa-mir-92a-1	13	19664672
hsa-miR-92a-2*	hsa-mir-92a-2	X	19664672
hsa-miR-93	hsa-mir-93	7	19664672
hsa-miR-93*	hsa-mir-93	7	19664672

Cis-Nats regulation

Simple Query:

Paper Collected: 6/30/2018

Last Update: 8/26/2018