AutismKB 2.0

Annotation Detail for HOXB1


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Basic Information Top
Gene Symbol:HOXB1 ( HOX2,HOX2I,Hox-2.9,MGC116843,MGC116844,MGC116845 )
Gene Full Name: homeobox B1
Band: 17q21.32
Quick LinksEntrez ID:3211; OMIM: 142968; Uniprot ID:HXB1_HUMAN; ENSEMBL ID: ENSG00000120094; HGNC ID: 5111
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
184Antp-type hexapeptide.
Location(AA) Modifications Resource
Location(AA) Modification Resource
29O-linkedHMM predict
29O-linkedHMM predict
30Phosphoserine(IKK)HMM predict
30O-linkedHMM predict
35O-linkedHMM predict
54Phosphoserine(CDC2)HMM predict
70O-linkedHMM predict
78O-linkedHMM predict
82O-linkedHMM predict
84Phosphotyrosine(Syk)HMM predict
84Phosphotyrosine(INSR)HMM predict
96Phosphoserine(ATM)HMM predict
98Phosphotyrosine(Syk)HMM predict
110Phosphotyrosine(Jak)HMM predict
110Phosphotyrosine(INSR)HMM predict
170O-linkedHMM predict
174Phosphothreonine(MAPK)HMM predict
176Phosphothreonine(MAPK)HMM predict
202Phosphoserine(CDC2)HMM predict
209N-linkedHMM predict
243N-linkedHMM predict
287Phosphoserine(IKK)HMM predict
290O-linkedHMM predict
291Phosphoserine(IKK)HMM predict
291Phosphoserine(CDK)HMM predict
291Phosphoserine(CDC2)HMM predict
295O-linkedHMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_002144
  • Location:chr17 43961805-43963270
  • strand:-
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
Oct4 hESGSE21916 43963004 43963856 852 160
RARA MCF7GSE15244 43964404 43965161 757 1512
RARG MCF7GSE15244 43964690 43965161 471 1655
TFAP2C MCF7GSE21234 43964517 43965123 606 1550
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
ER E2-MCF7GSE14664 43954776 43954880 104 6978
FOXA1 MCF7GSE15244 43954270 43954981 711 7180
FoxA1 MCF7MACSdata 43954541 43954951 410 7060
RARA MCF7GSE15244 43953898 43955833 1935 6940
RARG MCF7GSE15244 43952110 43952362 252 9570
RARG MCF7GSE15244 43953988 43955833 1845 6895
TFAP2C MCF7GSE21234 43954434 43955149 715 7014
hScc1 BcellGSE12603 43959319 43959831 512 2231
No data
Validated miRNA targets Top
Micro RNA Name Stem Loop Name The chromosome that miRNA located Publication
hsa-miR-10a hsa-mir-10a 17 19747919
hsa-miR-10a* hsa-mir-10a 17 19747919
No data
Cis-Nats regulation Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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