AutismKB 2.0

Annotation Detail for HOXD3


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Basic Information Top
Gene Symbol:HOXD3 ( HOX1D,HOX4,HOX4A,Hox-4.1,MGC10470 )
Gene Full Name: homeobox D3
Band: 2q31.1
Quick LinksEntrez ID:3232; OMIM: 142980; Uniprot ID:HXD3_HUMAN; ENSEMBL ID: ENSG00000128652; HGNC ID: 5137
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
165Antp-type hexapeptide.
Location(AA) Modifications Resource
Location(AA) Modification Resource
18Phosphotyrosine(Jak)HMM predict
34Phosphotyrosine(Syk)HMM predict
47SulfotyrosineHMM predict
53O-linkedHMM predict
71N-linkedHMM predict
89Phosphoserine(ATM)HMM predict
109O-linkedHMM predict
113O-linkedHMM predict
114O-linkedHMM predict
114Phosphoserine(CDC2)HMM predict
132N-linkedHMM predict
136O-linkedHMM predict
139O-linkedHMM predict
216N-linkedHMM predict
248Phosphoserine(ATM)HMM predict
250Phosphoserine(CDC2)HMM predict
250Phosphoserine(CDK)HMM predict
250Phosphoserine(MAPK)HMM predict
250Phosphoserine(IKK)HMM predict
313Phosphotyrosine(Jak)HMM predict
338Phosphoserine(CDK)HMM predict
374Phosphoserine(IKK)HMM predict
394Phosphotyrosine(Jak)HMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_006898
  • Location:chr2 176737050-176746071
  • strand:+
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 176732463 176733157 694 4241
hScc1 BcellGSE12603 176732644 176733082 438 4188
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 176748157 176748829 672 2422
CTCF G2GSE9613 176750824 176751184 360 4933
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 176738484 176738680 196 0
CTCF G2GSE9613 176744246 176745452 1206 0
hScc1 BcellGSE12603 176744363 176745375 1012 0
Validated miRNA targets Top
Cis-Nats regulation Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018