AutismKB 2.0

Annotation Detail for HOXD4


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Basic Information Top
Gene Symbol:HOXD4 ( HHO.C13,HOX-5.1,HOX4,HOX4B,Hox-4.2 )
Gene Full Name: homeobox D4
Band: 2q31.1
Quick LinksEntrez ID:3233; OMIM: 142981; Uniprot ID:HXD4_HUMAN; ENSEMBL ID: ENSG00000170166; HGNC ID: 5138
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
138Antp-type hexapeptide.
Location(AA) Modifications Resource
Location(AA) Modification Resource
65O-linkedHMM predict
114Phosphoserine(CAMK2)HMM predict
114Phosphoserine(ATM)HMM predict
114Phosphoserine(IKK)HMM predict
148N-linkedHMM predict
180Phosphothreonine(PKC)HMM predict
225O-linkedHMM predict
233Phosphoserine(CK1)HMM predict
233Phosphoserine(IKK)HMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_014621
  • Location:chr2 176724358-176726192
  • strand:+
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 176720134 176720338 204 4123
No data
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 176724765 176725129 364 0
hScc1 BcellGSE12603 176724869 176725066 197 0
Validated miRNA targets Top
Micro RNA Name Stem Loop Name The chromosome that miRNA located Publication
hsa-miR-10a hsa-mir-10a 17 19232136
hsa-miR-10a* hsa-mir-10a 17 19232136
No data
Cis-Nats regulation Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018