Annotation Detail for HOXD10
Basic Information Top
| Gene Symbol: | HOXD10 ( HOX4,HOX4D,HOX4E,Hox-4.4 ) |
|---|---|
| Gene Full Name: | homeobox D10 |
| Band: | 2q31.1 |
| Quick Links | Entrez ID:3236; OMIM: 142984; Uniprot ID:HXD10_HUMAN; ENSEMBL ID: ENSG00000128710; HGNC ID: 5133 |
| Relate to Another Database: | SFARIGene; denovo-db |
| No data |
| No data |
| Location(AA) | Modification | Resource |
|---|---|---|
| 7 | Phosphoserine(CDC2) | HMM predict |
| 11 | N-linked | HMM predict |
| 26 | O-linked | HMM predict |
| 80 | Phosphoserine(IKK) | HMM predict |
| 100 | O-linked | HMM predict |
| 151 | Phosphotyrosine(Jak) | HMM predict |
| 167 | N-linked | HMM predict |
| 168 | N-linked | HMM predict |
| 169 | Phosphoserine(CDC2) | HMM predict |
| 214 | Phosphoserine(PKG) | HMM predict |
| 214 | Phosphoserine(IKK) | HMM predict |
| 218 | Phosphoserine(CDC2) | HMM predict |
| 236 | Phosphoserine(IKK) | HMM predict |
| 239 | Phosphoserine(MAPK) | HMM predict |
| 247 | Phosphoserine(CK2) | HMM predict |
| 247 | Phosphoserine(CK1) | HMM predict |
| 255 | Phosphothreonine(CDC2) | HMM predict |
| 255 | Phosphothreonine(MAPK) | HMM predict |
| 304 | N-linked | HMM predict |
- RefSeq ID: NM_002148
- Location:chr2 176689737-176692914
- strand:+
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | G2 | GSE9613 | 176689109 | 176689513 | 404 | 427 |
| H3K27me3 | colorectal | cancer | 176686837 | 176687885 | 1048 | 2377 |
| TFAP2C | MCF7 | GSE21234 | 176686893 | 176687411 | 518 | 2586 |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| H3K27me3 | colorectal | cancer | 176693726 | 176694399 | 673 | 1148 |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | G2 | GSE9613 | 176690467 | 176690699 | 232 | 0 |
| CTCF | G2 | GSE9613 | 176691645 | 176692342 | 697 | 0 |
| H3K27me3 | colorectal | cancer | 176689881 | 176691510 | 1629 | 0 |
| hScc1 | Bcell | GSE12603 | 176690430 | 176690806 | 376 | 0 |
| Micro RNA Name | Stem Loop Name | The chromosome that miRNA located | Publication |
|---|---|---|---|
| hsa-miR-10a | hsa-mir-10a | 17 | 17660710 |
| hsa-miR-10a* | hsa-mir-10a | 17 | 17660710 |
| hsa-miR-10b | hsa-mir-10b | 2 | 20843787 |
| hsa-miR-10b | hsa-mir-10b | 2 | 20351690 |
| hsa-miR-10b | hsa-mir-10b | 2 | 19593777 |
| hsa-miR-10b | hsa-mir-10b | 2 | 19536818 |
| hsa-miR-10b | hsa-mir-10b | 2 | 18373886 |
| hsa-miR-10b | hsa-mir-10b | 2 | 17898713 |
| hsa-miR-10b* | hsa-mir-10b | 2 | 20843787 |
| hsa-miR-10b* | hsa-mir-10b | 2 | 20351690 |
| hsa-miR-10b* | hsa-mir-10b | 2 | 19593777 |
| hsa-miR-10b* | hsa-mir-10b | 2 | 19536818 |
| hsa-miR-10b* | hsa-mir-10b | 2 | 18373886 |
| hsa-miR-10b* | hsa-mir-10b | 2 | 17898713 |
| hsa-miR-125b | hsa-mir-125b-1 | 11 | 19593777 |
| hsa-miR-125b | hsa-mir-125b-2 | 21 | 19593777 |
| hsa-miR-126 | hsa-mir-126 | 9 | 18373886 |
| hsa-miR-126* | hsa-mir-126 | 9 | 18373886 |
| hsa-miR-141 | hsa-mir-141 | 12 | 19593777 |
| hsa-miR-141* | hsa-mir-141 | 12 | 19593777 |
| hsa-miR-200b | hsa-mir-200b | 1 | 19593777 |
| hsa-miR-200b* | hsa-mir-200b | 1 | 19593777 |
| hsa-miR-200c | hsa-mir-200c | 12 | 19593777 |
| hsa-miR-200c* | hsa-mir-200c | 12 | 19593777 |
| hsa-miR-205 | hsa-mir-205 | 1 | 19593777 |
| hsa-miR-206 | hsa-mir-206 | 6 | 18373886 |
| hsa-miR-21 | hsa-mir-21 | 17 | 19593777 |
| hsa-miR-21* | hsa-mir-21 | 17 | 19593777 |
| hsa-miR-30a | hsa-mir-30a | 6 | 19593777 |
| hsa-miR-30a* | hsa-mir-30a | 6 | 19593777 |
| hsa-miR-30e | hsa-mir-30e | 1 | 19593777 |
| hsa-miR-30e* | hsa-mir-30e | 1 | 19593777 |
| hsa-miR-335 | hsa-mir-335 | 7 | 18373886 |
| hsa-miR-335* | hsa-mir-335 | 7 | 18373886 |
| hsa-miR-373 | hsa-mir-373 | 19 | 18373886 |
| hsa-miR-373* | hsa-mir-373 | 19 | 18373886 |
| hsa-miR-520c-3p | hsa-mir-520c | 19 | 18373886 |
| hsa-miR-520c-5p | hsa-mir-520c | 19 | 18373886 |
| hsa-miR-7 | hsa-mir-7-1 | 9 | 18922890 |
| hsa-miR-7 | hsa-mir-7-2 | 15 | 18922890 |
| hsa-miR-7 | hsa-mir-7-3 | 19 | 18922890 |
| hsa-miR-7-1* | hsa-mir-7-1 | 9 | 18922890 |
| ID in Tarbase | Data Type | Support Type | miRNA | Gene | Direct Support | Publication |
|---|---|---|---|---|---|---|
| 236 | mRNA repression | TRUE | miR-10b | HOXD10 | Luciferase assay | 17898713 |
| Ensembl | Protein Type | Differentially expressed in | Pathology or Event | Mis Regulation | Gene Expression | Tumour Involvement |
| ENSG00000128710 | n_a | breast cancer metastasis | up regulated | n_a | malignant tumour |
Cis-Nats regulation