Annotation Detail for HPCAL1
Basic Information Top
| Gene Symbol: | HPCAL1 ( BDR1,HLP2,VILIP-3 ) |
|---|---|
| Gene Full Name: | hippocalcin-like 1 |
| Band: | 2p25.1 |
| Quick Links | Entrez ID:3241; OMIM: 600207; Uniprot ID:HPCL1_HUMAN; ENSEMBL ID: ENSG00000115756; HGNC ID: 5145 |
| Relate to Another Database: | SFARIGene; denovo-db |
| No data |
| No data |
| Location(AA) | Modification | Resource |
|---|---|---|
| 115 | Phosphotyrosine(INSR) | HMM predict |
| 144 | Phosphothreonine(CDC2) | HMM predict |
| 165 | Phosphoserine(PKG) | HMM predict |
- RefSeq ID: NM_002149
- Location:chr2 10360490-10485192
- strand:+
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CBP | T30-glioblastoma | GSE21026 | 10355225 | 10356282 | 1057 | 4737 |
| CTCF | G2 | GSE9613 | 10340590 | 10340953 | 363 | 19719 |
| CTCF | G2 | GSE9613 | 10342230 | 10342490 | 260 | 18131 |
| CTCF | G2 | GSE9613 | 10342964 | 10343855 | 891 | 17081 |
| CTCF | G2 | GSE9613 | 10344131 | 10344715 | 584 | 16068 |
| CTCF | G2 | GSE9613 | 10354859 | 10355088 | 229 | 5517 |
| Fos | K562 | GSE19551 | 10340691 | 10341420 | 729 | 19435 |
| Fos | K562 | GSE19551 | 10355379 | 10356009 | 630 | 4797 |
| H3ac | HepG2 | E | 10358420 | 10358732 | 312 | 1915 |
| P300 | T0-glioblastoma | GSE21026 | 10355362 | 10356139 | 777 | 4740 |
| P300 | T30-glioblastoma | GSE21026 | 10347032 | 10348090 | 1058 | 12930 |
| P300 | T30-glioblastoma | GSE21026 | 10355174 | 10356221 | 1047 | 4793 |
| PHF8 | 293T | GSE20725 | 10359661 | 10361094 | 1433 | 113 |
| Rb | Growing | GSE19898 | 10355513 | 10355766 | 253 | 4851 |
| SRF | Hela | GSE8489 | 10358420 | 10358732 | 312 | 1915 |
| TFAP2C | MCF7 | GSE21234 | 10340788 | 10341333 | 545 | 19430 |
| TFAP2C | MCF7 | GSE21234 | 10342671 | 10343822 | 1151 | 17244 |
| TFAP2C | MCF7 | GSE21234 | 10343846 | 10344753 | 907 | 16191 |
| TFAP2C | MCF7 | GSE21234 | 10346891 | 10347326 | 435 | 13382 |
| TFAP2C | MCF7 | GSE21234 | 10347357 | 10348018 | 661 | 12803 |
| TFAP2C | MCF7 | GSE21234 | 10355546 | 10355924 | 378 | 4756 |
| hScc1 | Bcell | GSE12603 | 10343195 | 10343577 | 382 | 17105 |
| p130 | shRbSenescent | GSE19898 | 10355470 | 10355831 | 361 | 4840 |
| No data |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | G2 | GSE9613 | 10359916 | 10361074 | 1158 | 0 |
Validated miRNA targets| Cluster ID | Plue Type | Plus Gene Name | Plus Chromosome | Plus Start | Plus End | Overlap Length | Minus Type | Minus Gene Name | Minus Chromosome | Minus Star | Minus End | Type |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 13910 | mRNA | HPCAL1 | chr2 | 10393637 | 10518340 | 4669 | EST | chr2 | 10498435 | 10503104 | Non-exonic Bidirectional (NOB) pairs | |