AutismKB 2.0

Annotation Detail for APCS


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Basic Information Top
Gene Symbol:APCS ( MGC88159,PTX2,SAP )
Gene Full Name: amyloid P component, serum
Band: 1q23.2
Quick LinksEntrez ID:325; OMIM: 104770; Uniprot ID:SAMP_HUMAN; ENSEMBL ID: ENSG00000132703; HGNC ID: 584
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
1N-acetylmethionine.
12Phosphothreonine.
13Phosphoserine.
21Phosphothreonine.
51N-linked (GlcNAc...).
Location(AA) Modifications Resource
51N-linked (GlcNAc...)./FTId=CAR
Location(AA) Modification Resource
43Phosphothreonine(MAPK)HMM predict
51N-linkedHMM predict
100Phosphothreonine(PKA)HMM predict
129N-linkedHMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_001639
  • Location:chr1 157824239-157825283
  • strand:+
No data
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CBP T30-glioblastomaGSE21026 157834304 157835277 973 9507
P300 T0-glioblastomaGSE21026 157834476 157834991 515 9450
P300 T30-glioblastomaGSE21026 157834509 157835199 690 9571
No data
Validated miRNA targets Top
Micro RNA Name Stem Loop Name The chromosome that miRNA located Publication
hsa-miR-142-3p hsa-mir-142 17 19794140
hsa-miR-142-5p hsa-mir-142 17 19794140
hsa-miR-21 hsa-mir-21 17 20489163
hsa-miR-21* hsa-mir-21 17 20489163
No data
Cis-Nats regulation Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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