AutismKB 2.0

Annotation Detail for BIRC3


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Basic Information Top
Gene Symbol:BIRC3 ( AIP1,API2,CIAP2,HAIP1,HIAP1,MALT2,MIHC,RNF49,c-IAP2 )
Gene Full Name: baculoviral IAP repeat-containing 3
Band: 11q22.2
Quick LinksEntrez ID:330; OMIM: 601721; Uniprot ID:BIRC3_HUMAN; ENSEMBL ID: ENSG00000023445; HGNC ID: 591
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
No data
No data
Location(AA) Modification Resource
81Phosphoserine(CDC2)HMM predict
83Phosphothreonine(PKC)HMM predict
109Phosphoserine(ATM)HMM predict
112O-linkedHMM predict
119N-linkedHMM predict
139Phosphoserine(IKK)HMM predict
141Phosphoserine(IKK)HMM predict
141Phosphoserine(CDK)HMM predict
141Phosphoserine(CDC2)HMM predict
294S-palmitoylHMM predict
351Phosphoserine(CDC2)HMM predict
591CysteineHMM predict
592ArginineHMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_001165
  • Location:chr11 101693403-101713673
  • strand:+
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
FOXA1 DLD1GSE12801 101682194 101682501 307 11056
FOXA1 MCF7GSE15244 101682084 101682501 417 11111
GATA3 MCF7GSE15244 101692942 101693420 478 223
H3ac HepG2E 101692630 101693670 1040 254
NRSF mAbJurkat 101683307 101683522 215 9989
NRSF pAbJurkat 101683307 101683522 215 9989
Oct1 HelaGSE14283 101679760 101679791 31 13628
RARA MCF7GSE15244 101693066 101693706 640 18
Rb QuiescentGSE19898 101693044 101693331 287 216
Rb shRbQuiescentGSE19898 101693125 101693301 176 191
TAF HelaGSE8489 101692785 101693706 921 158
TFAP2C MCF7GSE21234 101682026 101682468 442 11157
hScc1 BcellGSE12603 101693138 101693588 450 41
hScc1 CdLSGSE12603 101692895 101693814 919 49
p130 shRbQuiescentGSE19898 101693113 101693619 506 38
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 101717757 101717986 229 4198
CTCF CD4SISSRdata 101717757 101717986 229 4198
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
FOXA1 MCF7GSE15244 101693102 101693778 676 0
H3K4me3 colorectalcancer 101693778 101694023 245 0
H3K4me3 colorectalcancer 101694572 101694942 370 0
H3K4me3 colorectalcancer 101695302 101695812 510 0
NFkBII GM10847GSE19485 101692475 101695096 2621 0
NFkBII GM12878GSE19485 101691662 101697378 5716 0
NFkBII GM12892GSE19485 101692067 101695301 3234 0
NFkBII GM15510GSE19485 101692465 101695885 3420 0
NFkBII GM18505GSE19485 101691834 101695154 3320 0
NFkBII GM18526GSE19485 101691752 101695133 3381 0
Oct1 HelaGSE14283 101705098 101705128 30 0
P300 T30-glioblastomaGSE21026 101692711 101694107 1396 0
RARG MCF7GSE15244 101693028 101693814 786 0
TAF HelaGSE8489 101695302 101695812 510 0
TFAP2C MCF7GSE21234 101693183 101693747 564 0
p130 SenescentGSE19898 101693250 101693648 398 0
Validated miRNA targets Top
Micro RNA Name Stem Loop Name The chromosome that miRNA located Publication
hsa-let-7a hsa-let-7a-1 9 18199536
hsa-let-7a hsa-let-7a-2 11 18199536
hsa-let-7a hsa-let-7a-3 22 18199536
hsa-let-7a* hsa-let-7a-1 9 18199536
hsa-let-7a* hsa-let-7a-3 22 18199536
hsa-let-7b hsa-let-7b 22 18199536
hsa-let-7b* hsa-let-7b 22 18199536
hsa-let-7c hsa-let-7c 21 18199536
hsa-let-7c* hsa-let-7c 21 18199536
hsa-let-7d hsa-let-7d 9 18199536
hsa-let-7d* hsa-let-7d 9 18199536
hsa-let-7e hsa-let-7e 19 18199536
hsa-let-7e* hsa-let-7e 19 18199536
hsa-let-7f hsa-let-7f-1 9 18199536
hsa-let-7f hsa-let-7f-2 X 18199536
hsa-let-7f-1* hsa-let-7f-1 9 18199536
hsa-let-7f-2* hsa-let-7f-2 X 18199536
hsa-let-7g hsa-let-7g 3 18199536
hsa-let-7g* hsa-let-7g 3 18199536
hsa-let-7i hsa-let-7i 12 18199536
hsa-let-7i* hsa-let-7i 12 18199536
hsa-miR-100 hsa-mir-100 11 18199536
hsa-miR-100* hsa-mir-100 11 18199536
hsa-miR-125b hsa-mir-125b-1 11 18199536
hsa-miR-125b hsa-mir-125b-2 21 18199536
hsa-miR-200a hsa-mir-200a 1 18199536
hsa-miR-200a* hsa-mir-200a 1 18199536
hsa-miR-214 hsa-mir-214 1 18199536
hsa-miR-214* hsa-mir-214 1 18199536
hsa-miR-34a hsa-mir-34a 1 17540599
hsa-miR-34a* hsa-mir-34a 1 17540599
No data
Cis-Nats regulation Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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