Annotation Detail for HTR2A
Basic Information Top
| Gene Symbol: | HTR2A ( 5-HT2A,HTR2 ) |
|---|---|
| Gene Full Name: | 5-hydroxytryptamine (serotonin) receptor 2A |
| Band: | 13q14.2 |
| Quick Links | Entrez ID:3356; OMIM: 182135; Uniprot ID:5HT2A_HUMAN; ENSEMBL ID: ENSG00000102468; HGNC ID: 5293 |
| Relate to Another Database: | SFARIGene; denovo-db |
| Location(AA) | Modification | |
|---|---|---|
| 8 | N-linked (GlcNAc...) (Potential). | |
| 38 | N-linked (GlcNAc...) (Potential). | |
| 44 | N-linked (GlcNAc...) (Potential). | |
| 51 | N-linked (GlcNAc...) (Potential). | |
| 54 | N-linked (GlcNAc...) (Potential). | |
| 471 | PDZ-binding. | |
| Location(AA) | Modifications | Resource |
|---|---|---|
| 8 | N-linked (GlcNAc...) (Potential). | Swiss-Prot 53.0 |
| 38 | N-linked (GlcNAc...) (Potential). | Swiss-Prot 53.0 |
| 44 | N-linked (GlcNAc...) (Potential). | Swiss-Prot 53.0 |
| 51 | N-linked (GlcNAc...) (Potential). | Swiss-Prot 53.0 |
| 54 | N-linked (GlcNAc...) (Potential). | Swiss-Prot 53.0 |
| Location(AA) | Modification | Resource |
|---|---|---|
| 8 | N-linked | HMM predict |
| 10 | Phosphoserine(IKK) | HMM predict |
| 10 | Phosphoserine(CK1) | HMM predict |
| 10 | O-linked | HMM predict |
| 38 | N-linked | HMM predict |
| 44 | N-linked | HMM predict |
| 51 | N-linked | HMM predict |
| 54 | N-linked | HMM predict |
| 60 | S-palmitoyl | HMM predict |
| 67 | Phosphoserine(CK1) | HMM predict |
| 107 | N-linked | HMM predict |
| 110 | N-linked | HMM predict |
| 111 | Phosphotyrosine(INSR) | HMM predict |
| 174 | Phosphotyrosine(Jak) | HMM predict |
| 287 | Phosphoserine(IKK) | HMM predict |
| 290 | Phosphoserine(CK1) | HMM predict |
| 384 | N-linked | HMM predict |
| 422 | Phosphoserine(ATM) | HMM predict |
| 457 | Phosphoserine(CK1) | HMM predict |
- RefSeq ID: NM_000621
- Location:chr13 46305513-46368175
- strand:-
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| hScc1 | CdLS | GSE12603 | 46377268 | 46377932 | 664 | 9425 |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | CD4 | GSE12889 | 46303864 | 46303988 | 124 | 1588 |
| CTCF | CD4 | SISSRdata | 46303864 | 46303988 | 124 | 1588 |
| hScc1 | Bcell | GSE12603 | 46303704 | 46304084 | 380 | 1620 |
| hScc1 | CdLS | GSE12603 | 46303635 | 46304327 | 692 | 1533 |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | G2 | GSE9613 | 46325735 | 46325903 | 168 | 0 |
| CTCF | G2 | GSE9613 | 46362501 | 46363104 | 603 | 0 |
| CTCF | G2 | GSE9613 | 46366030 | 46366574 | 544 | 0 |
| Oct1 | Hela | GSE14283 | 46350218 | 46350250 | 32 | 0 |
| TFAP2C | MCF7 | GSE21234 | 46338238 | 46338871 | 633 | 0 |
| hScc1 | Bcell | GSE12603 | 46366030 | 46366831 | 801 | 0 |
| hScc1 | CdLS | GSE12603 | 46365813 | 46366801 | 988 | 0 |
Validated miRNA targets| Cluster ID | Plue Type | Plus Gene Name | Plus Chromosome | Plus Start | Plus End | Overlap Length | Minus Type | Minus Gene Name | Minus Chromosome | Minus Star | Minus End | Type |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 7174 | EST | chr13 | 46324278 | 46328511 | 4233 | mRNA | HTR2A | chr13 | 46305513 | 46368176 | Non-exonic Bidirectional (NOB) pairs | |