AutismKB 2.0

Annotation Detail for ICAM1


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Basic Information Top
Gene Symbol:ICAM1 ( BB2,CD54,P3.58 )
Gene Full Name: intercellular adhesion molecule 1
Band: 19p13.2
Quick LinksEntrez ID:3383; OMIM: 147840; Uniprot ID:ICAM1_HUMAN; ENSEMBL ID: ENSG00000090339; HGNC ID: 5344
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
130N-linked (GlcNAc...).
145N-linked (GlcNAc...).
154Cell attachment site; atypical
183N-linked (GlcNAc...).
202N-linked (GlcNAc...).
260N-linked (GlcNAc...).
267N-linked (GlcNAc...).
296N-linked (GlcNAc...).
385N-linked (GlcNAc...).
406N-linked (GlcNAc...) (Potential).
521Phosphothreonine.
530Phosphothreonine.
Location(AA) Modifications Resource
130N-linked (GlcNAc...).Swiss-Prot 53.0
145N-linked (GlcNAc...).Swiss-Prot 53.0
183N-linked (GlcNAc...).Swiss-Prot 53.0
202N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
267N-linked (GlcNAc...).Swiss-Prot 53.0
296N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
385N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
406N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
501PhosphotyrosinePhospho.ELM 6.0
512PhosphotyrosinePhospho.ELM 6.0
Location(AA) Modification Resource
5PhosphoserineHMM predict
5Phosphoserine(CDK)HMM predict
29Phosphothreonine(PKC)HMM predict
30O-linkedHMM predict
32Phosphoserine(CDC2)HMM predict
32Phosphoserine(CDK)HMM predict
47O-linkedHMM predict
130N-linkedHMM predict
145N-linkedHMM predict
202N-linkedHMM predict
217Phosphothreonine(MAPK)HMM predict
217O-linkedHMM predict
223Phosphoserine(MAPK)HMM predict
260N-linkedHMM predict
275Phosphoserine(PKG)HMM predict
277Phosphoserine(CK2)HMM predict
279O-linkedHMM predict
296N-linkedHMM predict
306O-linkedHMM predict
370Phosphoserine(IKK)HMM predict
370Phosphoserine(PKB)HMM predict
372O-linkedHMM predict
385N-linkedHMM predict
406N-linkedHMM predict
412N-linkedHMM predict
462Phosphothreonine(PKC)HMM predict
476Phosphoserine(MAPK)HMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_000201
  • Location:chr19 10242778-10258290
  • strand:+
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 10241195 10241397 202 1483
CTCF CD4SISSRdata 10241195 10241397 202 1483
CTCF G2GSE9613 10241157 10241360 203 1520
NFkBII GM10847GSE19485 10241051 10244160 3109 173
NFkBII GM12878GSE19485 10240971 10244324 3353 131
NFkBII GM12892GSE19485 10240765 10244373 3608 210
NFkBII GM15510GSE19485 10240942 10244141 3199 237
NFkBII GM18505GSE19485 10240954 10244143 3189 230
NFkBII GM18526GSE19485 10240771 10244168 3397 309
Pol2 GM12878GSE19551 10241570 10243761 2191 113
hScc1 BcellGSE12603 10241157 10241482 325 1459
hScc1 CdLSGSE12603 10241157 10242884 1727 758
hScc1 G2GSE9613 10241157 10241437 280 1482
No data
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
ER E2-MCF7GSE14664 10245930 10245962 32 0
NFkBII GM12878GSE19485 10249532 10250749 1217 0
Oct1 HelaGSE14283 10256543 10256590 47 0
PHF8 Hs68plusFBSGSE20725 10241922 10244372 2450 0
p63 keratinocytesGSE17611 10257377 10258256 879 0
Validated miRNA targets Top
Micro RNA Name Stem Loop Name The chromosome that miRNA located Publication
hsa-miR-17 hsa-mir-17 13 19949084
hsa-miR-17* hsa-mir-17 13 19949084
hsa-miR-221 hsa-mir-221 X 20110463
hsa-miR-221* hsa-mir-221 X 20110463
hsa-miR-222 hsa-mir-222 X 19520829
hsa-miR-222* hsa-mir-222 X 19520829
hsa-miR-31 hsa-mir-31 9 19949084
hsa-miR-31* hsa-mir-31 9 19949084
hsa-miR-339-3p hsa-mir-339 7 19520829
hsa-miR-339-5p hsa-mir-339 7 19520829
No data
Cis-Nats regulation Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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