Annotation Detail for VSX2
Basic Information Top
| Gene Symbol: | VSX2 ( CHX10,HOX10,MCOP2,MCOPCB3,RET1 ) |
|---|---|
| Gene Full Name: | visual system homeobox 2 |
| Band: | 14q24.3 |
| Quick Links | Entrez ID:338917; OMIM: 142993; Uniprot ID:VSX2_HUMAN; ENSEMBL ID: ENSG00000119614; HGNC ID: 1975 |
| Relate to Another Database: | SFARIGene; denovo-db |
| Location(AA) | Modification | |
|---|---|---|
| 11 | N6-acetyllysine (By similarity). | |
| 317 | OAR. | |
| Location(AA) | Modifications | Resource |
|---|
| No data |
- RefSeq ID: NM_182894
- Location:chr14 73775927-73799186
- strand:+
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| H3K27me3 | colorectal | cancer | 73768888 | 73769770 | 882 | 6599 |
| H3K27me3 | colorectal | cancer | 73773150 | 73773332 | 182 | 2687 |
| H3K27me3 | colorectal | cancer | 73773662 | 73776097 | 2435 | 1048 |
| Oct1 | Hela | GSE14283 | 73763561 | 73763592 | 31 | 12351 |
| hScc1 | Bcell | GSE12603 | 73755818 | 73756132 | 314 | 19953 |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| NRSF | mAb | Jurkat | 73799858 | 73800534 | 676 | 1010 |
| NRSF-mono | Jurkat | QuESTdata | 73799571 | 73800123 | 552 | 661 |
| NRSF-poly | Jurkat | QuESTdata | 73799656 | 73800058 | 402 | 671 |
| Oct1 | Hela | GSE14283 | 73801575 | 73801618 | 43 | 2410 |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | CD4 | GSE12889 | 73787979 | 73788283 | 304 | 0 |
| CTCF | CD4 | GSE12889 | 73793855 | 73794217 | 362 | 0 |
| CTCF | CD4 | SISSRdata | 73787979 | 73788283 | 304 | 0 |
| CTCF | CD4 | SISSRdata | 73793855 | 73794217 | 362 | 0 |
| CTCF | Hela | GSE12889 | 73788037 | 73788411 | 374 | 0 |
| CTCF | Hela | GSE12889 | 73793907 | 73794177 | 270 | 0 |
| CTCF | G2 | GSE9613 | 73788023 | 73788812 | 789 | 0 |
| CTCF | G2 | GSE9613 | 73793646 | 73794389 | 743 | 0 |
| CTCF | G2 | GSE9613 | 73796998 | 73797310 | 312 | 0 |
| ER | E2-MCF7 | GSE14664 | 73787007 | 73787040 | 33 | 0 |
| H3K27me3 | colorectal | cancer | 73777940 | 73778230 | 290 | 0 |
| Oct1 | Hela | GSE14283 | 73787007 | 73787041 | 34 | 0 |
| Rb | Growing | GSE19898 | 73788458 | 73788650 | 192 | 0 |
| hScc1 | Bcell | GSE12603 | 73776237 | 73776635 | 398 | 0 |
| hScc1 | Bcell | GSE12603 | 73788023 | 73788306 | 283 | 0 |
| hScc1 | Bcell | GSE12603 | 73793821 | 73794604 | 783 | 0 |
| hScc1 | Bcell | GSE12603 | 73798194 | 73798480 | 286 | 0 |
| hScc1 | CdLS | GSE12603 | 73788023 | 73788462 | 439 | 0 |
| hScc1 | CdLS | GSE12603 | 73793564 | 73794678 | 1114 | 0 |
Validated miRNA targets